Gene YpsIP31758_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3939 
Symbol 
ID5387285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4416634 
End bp4417236 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID640866970 
ProductLysE family translocator protein 
Protein accessionYP_001402887 
Protein GI153949657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA GTTTATTTCT GTCAATGGTT GGTTTTCTCT GGGTCGCGGC TATTACCCCT 
GGTCCAAATA ATATGTTGCT TACCTCTGCG GGTGCTAACT TCGGCTTTAT GCGCTCTATC 
TGGTTGATGT TAGGTATTAT GTTAGGTATG CAGAGTATGC TGCTGCTGGT GGCTTTTGGC 
GTGGGTAGCC TGATTTTGAT CTACCCCTCC CTCCATCTGG CATTGAAAAT TTTGGGGAGT 
TTGTATCTGC TGTGGCTGGC ATGGAAAATT GCCACTTCAG CCTATGAAAA ATTAGACACC 
AATGTGGCCC CAGCCAAACC GCTACGTTTG TATCAGGGTT GGTTATTGCA ATTTCTTAAC 
CCAAAAGCCT GGCTGATGGG GTTAGGCTCG GTAGCCAGTT TCAGCATGGC GGGCGCAGCC 
TACAATCACT CCATCTTGAT GATAAGCCTG GGGATGTTTA TGGTGAATCT GGTGGCAGGG 
ATTATTTGGC TGGGTTTTGG CACCCTGATT GGCCGCCTGC TCGGCAGCCG CCGTGCTTGG 
TTTACCTTTA ATATCTCAAT GGGCTTGCTG ACCGCCGCGT GTGTTTTACT GATCTGGCAT 
TAA
 
Protein sequence
MELSLFLSMV GFLWVAAITP GPNNMLLTSA GANFGFMRSI WLMLGIMLGM QSMLLLVAFG 
VGSLILIYPS LHLALKILGS LYLLWLAWKI ATSAYEKLDT NVAPAKPLRL YQGWLLQFLN 
PKAWLMGLGS VASFSMAGAA YNHSILMISL GMFMVNLVAG IIWLGFGTLI GRLLGSRRAW 
FTFNISMGLL TAACVLLIWH