Gene YpsIP31758_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3925 
Symbol 
ID5385966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4402732 
End bp4403454 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content45% 
IMG OID640866956 
Producthypothetical protein 
Protein accessionYP_001402873 
Protein GI153950437 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000338087 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT CGCTTCTCTG TAGCGAAACC AGTGAACTGG ATTTACTGGA TGAACGTCCG 
TTCAGTCAGA CGGACCATGA AATACTAAAG TCATACGAAG TTGTCGTGGA TGGCTTGGCA
ATGCTTATTG GTGGGCACTG TGAAATTGTT TTGCACTCAC TGGAGGATTT GAAAAATTCT
GCGGTGAGAA TTGCTAACGG CGAACACACG GGGCGGCAGA TTGGCTCGCC TATAACCGAT
TTGGCACTAC GCATGCTCCA TGATATGGCT GGTGCTGACA GTAGTGTTTC AAAAGCTTAT
TTCACGCGGG CCAAAAGCGG TGTCCTGATG AAATCAGTGA CAATCGCTAT TCGTAACCGT
GACCAGCGGG TGATTGGTTT GTTGTGCATT AACATGAATC TGGATGTTCC TTTCTCACAA
ATCATTCAGA CTTTTATGCC ACCAGAAACA CAAGAAGTGC CTTCCTCCGT CAACTTTGCT
TCATCTGTCG ATGATCTGGT TGCGCAAACG CTGGAGTTCA CTATTGAAGA AGTGAATGCG
GATCGTAACG TTTCTAACAA CGCCAAGAAT CGCCAGGTTG TACTCAATCT TTATGAAAAA
GGTATTTTTG ATATAAAAGA TGCCATAAAC CAAGTTGCAG AACGCCTCAA TATCTCAAAG
CACACGGTAT ATCTTTACAT TCGTCAGTTC AAAAGTGGCG ATCTCGTCGG GCACGAACGT
TAA
 
Protein sequence
MSNSLLCSET SELDLLDERP FSQTDHEILK SYEVVVDGLA MLIGGHCEIV LHSLEDLKNS 
AVRIANGEHT GRQIGSPITD LALRMLHDMA GADSSVSKAY FTRAKSGVLM KSVTIAIRNR
DQRVIGLLCI NMNLDVPFSQ IIQTFMPPET QEVPSSVNFA SSVDDLVAQT LEFTIEEVNA
DRNVSNNAKN RQVVLNLYEK GIFDIKDAIN QVAERLNISK HTVYLYIRQF KSGDLVGHER