Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3914 |
Symbol | rplD |
ID | 5386062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4394234 |
End bp | 4394839 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640866945 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001402862 |
Protein GI | 153948290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 8.05295e-19 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTGG TAATGAAAGA CGCGCCAGGC GCGCTGACTG TTTCCGAAAC TACCTTCGGG CGTGATTTCA ATGAAGCGCT TGTACATCAG GTTGTTGTTG CTTACGCAGC AGGTGCCCGT CAAGGTACTC GTGCTCAGAA GACCCGTGCT GAAGTAACAG GTTCCGGTAA AAAACCGTGG CGTCAGAAAG GTACCGGCCG TGCGCGTGCA GGTTCTGTAA AGAGCCCGAT CTGGCGTTCA GGTGGTGTGA CCTTTGCTGC AAAGCCTCAG GACCACAGTC AAAAAGTAAA TAAAAAGATG TACCGCGGCG CGCTGAAAAG CATTCTGTCC GAATTGGTAC GTCAAGATCG TCTGATCATT GTCGAAAAGT TCTCTGTTGA AGCACCTAAA ACTAAGTTGC TGGCGCAGAA ACTGAAAGAT ATGGCTCTGG AAGATGTGCT GATCGTAACG GGTGAACTGG ACGAGAACTT GTTCTTGGCC GCTCGCAACC TGTACAAGGT TGATGTTCGC GATGTAGCCG GTATTGATCC AGTTAGCCTG ATCGCCTTCG ACAAAGTGGT TATGACTGCT GATGCTGTGA AGCAAGTTGA GGAGATGCTG GCATGA
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Protein sequence | MELVMKDAPG ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW RQKGTGRARA GSVKSPIWRS GGVTFAAKPQ DHSQKVNKKM YRGALKSILS ELVRQDRLII VEKFSVEAPK TKLLAQKLKD MALEDVLIVT GELDENLFLA ARNLYKVDVR DVAGIDPVSL IAFDKVVMTA DAVKQVEEML A
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