Gene YpsIP31758_3908 details

Gene Information

• Locus tag: YpsIP31758_3908
• Symbol: rplP
• ID: 5387555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 4391315
• End bp: 4391725
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640866939
• Product: 50S ribosomal protein L16
• Protein accession: YP_001402856
• Protein GI: 153949735
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000000000657151
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACAAC CAAAGCGTAC AAAATTCCGT AAGATGCACA AAGGCCGTAA CCGTGGCCTT 
GCGCAAGGTA CGGATGTTAG CTTCGGTGAG TTCGGCCTGA AAGCTTGTGG CCGTTGCCGC 
CTGACGGCTC GTCAAATCGA AGCAGCCCGT CGTGCGATGA CACGTGCAAT TAAGCGTCAA 
GGTAAGGTCT GGATCCGTGT ATTCCCGGAC AAACCGATCA CTGAGAAGCC GCTCGAAGTG 
CGTATGGGTA AAGGTAAGGG TAACGTGGAG TATTGGGTTG CCCTGATCCA GCCAGGAAAA 
GTATTGTTTG AAATGGCTGG TGTTCCTGAA GAAACTGCAC GTGAAGCATT TAAGCTTGCT 
GCAGCGAAAC TGCCTGTCGG AACCACCTTT GTAACTAAGA CGGTGATGTA A 

 

Protein sequence

MLQPKRTKFR KMHKGRNRGL AQGTDVSFGE FGLKACGRCR LTARQIEAAR RAMTRAIKRQ 
GKVWIRVFPD KPITEKPLEV RMGKGKGNVE YWVALIQPGK VLFEMAGVPE ETAREAFKLA 
AAKLPVGTTF VTKTVM