| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3889 |
|---|
| Symbol | rplQ |
|---|
| ID | 5387801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4381439 |
|---|
| End bp | 4381828 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640866920 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_001402837 |
|---|
| Protein GI | 153948360 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.000172073 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTG AACCGTAACA GCAGCCATCG CCAGGCTATG
TTCCGTAACA TGGCCGGCTC TTTGGTTCGT CATGAGATCA TCAAGACGAC CCTGCCGAAA
GCGAAAGAGC TGCGTCGCGT TGTTGAGCCG CTGATTACTC TTGCCAAGAC CGACAACGTA
GCTAATCGTC GTCTGGCATT CGCCCGCACT CGTGATAACG AGATCGTGGC AAAACTGTTT
AACGAGCTAG GCCCGCGTTT CGCGAGCCGC GCCGGTGGTT ACACTCGCAT TCTTAAGTGT
GGCTTCCGTG CAGGCGACAA CGCACCGATG GCTTACATCG AGTTAGTTGA TCGTGCTGCA
TCGCAAGCAG AAGTAGTTGC TGCAGAGTAA
|
|---|
| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMAGSLVR HEIIKTTLPK AKELRRVVEP LITLAKTDNV
ANRRLAFART RDNEIVAKLF NELGPRFASR AGGYTRILKC GFRAGDNAPM AYIELVDRAA
SQAEVVAAE
|
|---|
| |