Gene YpsIP31758_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3885 
SymboltrkA 
ID5385422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4378241 
End bp4379617 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content44% 
IMG OID640866916 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_001402833 
Protein GI153949419 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0054195 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TTATTCTTGG GGCAGGGCAA GTTGGCGGGA CCCTGGCAGA AAACTTGGTG 
GGTGAAAATA ACGATATCAC TGTAGTCGAT ATCGACTCTG GTCGACTACG CCAACTGCAG
GATAAGTTTG ATTTACGTGT AGTACAAGGG TATGGCTCAC ACCCTAGAGT TCTACGAGAG
GCAGGAGCTG AGGATGCCGA TATGCTGGTA GCCGTGACTA ATTCTGATGA AACCAATATG
ATTGCCTGCC AAATCGCTTA CTCATTATTC AATACACCAA ATCGCATTGC TCGCATTCGA
TCAACTGAAT ATATACGTGA AGCAGATAAA CTCTTTCTGC CCGAAGCTGT ACCGATTGAC
CATTTAATCT CACCTGAACA ACTAGTCATT GACTATATCT ATAAGTTAAT CGAATACCCT
GGAGCACTAC AGGTCGTTAA CTTTGCTGAA GGTAAAGTTA GCATCGCAGC AGTCAAAGCC
TACTATGGCG GCCCATTGGT AGGGAATGCA TTGTCATCCT TACGTGAACA TATGCCACAT
ATTGATACTA GAGTCGCGGC TATATTTCGC CAAGATCGAC CAATCCGTCC ACAGGGATCA
ACAATTATTG AAGCTGGTGA TGAAGTCTTT TTTGTAGCGG CCTCTCAGCA TATACGAGCG
GTAATGAGTG AGTTACAGCG CCTGGAAAAA CCGTATAAAC GCATTATGAT TGTCGGTGGT
GGTAATGTCG GTGCAGGTCT GGCACTGCGT CTGGAAAAAG ACTACAGCGT AAAGTTAATT
GAACGTGACC AACAGCGGGC AGCTGAATTA GCTGAAATGC TACACGATAC TATCGTATTT
TATGGTGATG CATCAGACCA AGAATTACTT GCAGAAGAAC ATATTGAACA GGTTGATGTA
TTTATCGCCA TTACAAATGA TGATGAAGCC AATATTATGT CGGCTATGCT GGCAAAACGG
ATGGGTGCGA AAAAAGCGAT GGTACTTATC CAACGCAGTG CTTACGTCGA TTTGGTTCAG
GGAAGCGTTA TTGATATTGT TATATCACCG CAGCAAGCCA CTATTTCAGC ACTATTAGGT
CATGTCCGTA AAGCAGATAT CGTTAGTGTA TCCTCGCTGA GACGTGGCGT TGCTGAGGCA
ATAGAAGCTA TTGCTCATGG TGATGAAAGC ACTTCAAAAG TTGTCGGCCG GATGGTTGAA
GACATAAAGT TACCACCAGG AACAACTATT GGAGCTATCG TTCGGGGGGA TGAGGTTATT
ATTGCAAACA GTAACTCCAT AATTAAGCAA GGGGACCATG TAATAATGTT CATTACCCAC
AAAAAATTTG TACCCGATGT GGAACGGTTG TTCCAACCAA GCCCATTCTT CCTATAA
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNDITVVD IDSGRLRQLQ DKFDLRVVQG YGSHPRVLRE 
AGAEDADMLV AVTNSDETNM IACQIAYSLF NTPNRIARIR STEYIREADK LFLPEAVPID
HLISPEQLVI DYIYKLIEYP GALQVVNFAE GKVSIAAVKA YYGGPLVGNA LSSLREHMPH
IDTRVAAIFR QDRPIRPQGS TIIEAGDEVF FVAASQHIRA VMSELQRLEK PYKRIMIVGG
GNVGAGLALR LEKDYSVKLI ERDQQRAAEL AEMLHDTIVF YGDASDQELL AEEHIEQVDV
FIAITNDDEA NIMSAMLAKR MGAKKAMVLI QRSAYVDLVQ GSVIDIVISP QQATISALLG
HVRKADIVSV SSLRRGVAEA IEAIAHGDES TSKVVGRMVE DIKLPPGTTI GAIVRGDEVI
IANSNSIIKQ GDHVIMFITH KKFVPDVERL FQPSPFFL