Gene YpsIP31758_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3879 
Symbol 
ID5387288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4373037 
End bp4373576 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content47% 
IMG OID640866910 
Producttopoisomerase DNA binding C4 zinc finger domain-containing protein 
Protein accessionYP_001402827 
Protein GI153949414 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0000865305 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGA AAGTTATTAC TAAGGATAAT GGATCTTGTC CTGAGTGCGG GTCAGCGTTG 
GTGATTCGCA GTGGGGGGCA CGGTCCATTC CTTGGTTGTT CACATTATCC AGATTGCCAG 
TATATACGCC CACTAAAAGC GCAGGCTGAC GGGCATGTTG TGAAAACTCT GGAAGGGCAA 
CCTTGTCCTG AGTGTGGTTC GGATATGGTG CTACGCCAAG GCCGCTTCGG TATGTTTATT 
GGTTGCAGCC AATATCCACA GTGTGATCAT ACAGAAGTTA TAGATAAACC TGATGAGACG 
TCTATTGATT GCCCACAGTG TGGTCAAGGG AAACTGTTAC AACGTAAGTC TCGGTTTGGG 
AAAGTTTTTC ATGCCTGTAA TCGCTACCCC GACTGTCAAT TTACGCTCAA CCAACCGCCA 
ATTGCAGGAA AGTGTGGTTA TTGCCACTAC CCACTGTTAA TAGAAAAAAG AACGGCACGG 
GGTATCAAAC GTATCTGTGC CAGTAAGTTA TGTGGGAAGG CTGTAGCCAG TGAGTCATAG
 
Protein sequence
MTKKVITKDN GSCPECGSAL VIRSGGHGPF LGCSHYPDCQ YIRPLKAQAD GHVVKTLEGQ 
PCPECGSDMV LRQGRFGMFI GCSQYPQCDH TEVIDKPDET SIDCPQCGQG KLLQRKSRFG 
KVFHACNRYP DCQFTLNQPP IAGKCGYCHY PLLIEKRTAR GIKRICASKL CGKAVASES