| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3877 |
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| Symbol | aroE |
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| ID | 5387448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4371633 |
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| End bp | 4372454 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640866908 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001402825 |
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| Protein GI | 153948663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00000561624 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCAGA AGTTTGCAGT ATTTGGTAAT CCTATTAGTC ATAGTAAATC GCCGAGGATC
CATACGCTTT TTTCCGAGCA AACAGGCATT GAACATCGAT ATGGTAAGGT ATTAGCTCCT
TCTGAAGCCT TTGAGAACAC ATTAGTATCT TTTTTTGCTG ATGGTGCCCA GGGAGCGAAC
ATTACCACAC CGTTTAAAGA ACGCGCATAT GACCAATGTG ATGAATTAAC CGACCGTGCA
TCTCTGGCAG GGGCTGTTAA TACGATTAAG CGTTTGGAAG ATGGGCGCTT GTTGGGTGAC
AACACAGATG GTATTGGTTT GCTCAGTGAT CTTGAACGAC AAAACTTGAT CCGAACAACT
GATCATATTT TGTTGGTTGG GGCTGGTGGC GCTGCCCGAG GAGTGATCCT TCCTCTACTT
TCTTATGGGT GTACTGTGGT TGTTACCAAC CGGACACATA CCCGGGCGCA GCAACTGGCC
AAAGTATTTA ACCATATTGG TGATATTGAT GTTTGTGAAA TGTCGGAGTT GGCTGGACAA
CGATTCGATT TGGTTATAAA TGCGACGGCA TCAGGCCTTC ATGGAGAGGT ACCTAACTTA
CCAGCAGCTA TACTTACTTC TCAAACACGT TGTTACGATA TGTTCTATCA GGCGGGAACC
ACACCATTCT TGGCTTGGGC ACAACGATTG GGTTTAGCAG ATTATGCCGA TGGTTTAGGA
ATGCTGGTAG GGCAAGCAGC ACATGCTTTC AAACTTTGGC ACGGTGTGAT GCCTGAAATT
ACGCCAGTAT TAGCCCAGCT ACGCAGTGAG TTAGGTAAAT AG
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| Protein sequence | MDQKFAVFGN PISHSKSPRI HTLFSEQTGI EHRYGKVLAP SEAFENTLVS FFADGAQGAN
ITTPFKERAY DQCDELTDRA SLAGAVNTIK RLEDGRLLGD NTDGIGLLSD LERQNLIRTT
DHILLVGAGG AARGVILPLL SYGCTVVVTN RTHTRAQQLA KVFNHIGDID VCEMSELAGQ
RFDLVINATA SGLHGEVPNL PAAILTSQTR CYDMFYQAGT TPFLAWAQRL GLADYADGLG
MLVGQAAHAF KLWHGVMPEI TPVLAQLRSE LGK
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