Gene YpsIP31758_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3872 
SymbolmurB 
ID5385715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4363785 
End bp4364822 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID640866901 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_001402823 
Protein GI153947793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00188799 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATC AGCGTTCCTC TCTAAAACAC CTTAATACCT TTGCGCTACC TGCTTATGCA 
AGCAATGTCA TTAGTGCTGG CTCAGTAGAA ACATTAATTG CGGCTTGGCA TGAATCAAAA
GCCAAGCGAC AGCCGGTACT ATTACTAGGT GAAGGTAGCA ATGTGTTATT TATTAAAAAT
TTCTCTGGGA CAGTATTACT CAATAGGATT ATGGGGATTA CTTCTACCGA AGACAGTGCT
GCTTGGCATT TACATGTCGG TGCTGGGGAA AATTGGCATC AACTGGTATG TCATTCACTG
CAAAATAATA TGCCGGGGTT GGAAAATTTA GCGTTAATTC CAGGCTGTGT CGGCTCTGCG
CCGATCCAAA ATATAGGTGC CTATGGCGTT GAATTAAAAC AAGTATGTGA ATATGTTGAT
TTACTTGATA TGGATAAAGG TACTATTCAG CGTATCTCCG CTGAGGAGTG TCAGTTTGGT
TACCGTGACA GCATTTTTAA ACATCGCTAT GGGAATGGAT TTGCTATCGT ATCTGTCGGT
ATTAAATTGA TGAAATCATG GACTCCAACG CTGGGTTATG GCGACTTAAT ACATATGGAC
CCATTAACAG TTACTGCCAC AGATATTTTT AACTCTGTCT GTACAATGCG GCGGAGTAAA
CTTCCAGACC CAATGGTCAC TGGCAATGCC GGGAGTTTCT TCAAAAACCC TGTAGTAAGC
GCAGCAATCG CTGAGGAGAT CGTACATTGT TACCCCAATG CTCCTCATTA TCTGCAGCCA
GATGGGTCAG TAAAACTTGC AGCAGGTTGG TTGATCGATC AGTGTTCACT TAAGGGGTAC
CAGATTGGTG GTGCCGCAGT ACACCAGCAA CAAGCTCTGG TGCTGATTAA CCAGTCAGAA
GCGACTGGCC AAGATGTAAT ACATCTTGCA CGTTATATCC GCCAGCAGGT CGCACAGAGA
TTTTCAATCT GGCTAGAACC AGAGGTACGC TTTATTGCTG ATAATGGTGA AGTTAATGCT
GTGGAGCATT TATCGTGA
 
Protein sequence
MSNQRSSLKH LNTFALPAYA SNVISAGSVE TLIAAWHESK AKRQPVLLLG EGSNVLFIKN 
FSGTVLLNRI MGITSTEDSA AWHLHVGAGE NWHQLVCHSL QNNMPGLENL ALIPGCVGSA
PIQNIGAYGV ELKQVCEYVD LLDMDKGTIQ RISAEECQFG YRDSIFKHRY GNGFAIVSVG
IKLMKSWTPT LGYGDLIHMD PLTVTATDIF NSVCTMRRSK LPDPMVTGNA GSFFKNPVVS
AAIAEEIVHC YPNAPHYLQP DGSVKLAAGW LIDQCSLKGY QIGGAAVHQQ QALVLINQSE
ATGQDVIHLA RYIRQQVAQR FSIWLEPEVR FIADNGEVNA VEHLS