Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3871 |
Symbol | birA |
ID | 5384368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4362829 |
End bp | 4363788 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640866900 |
Product | biotin--protein ligase |
Protein accession | YP_001402822 |
Protein GI | 153948890 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.000364778 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGATA TCAGGGTCCC CTTACGGTTA GTCAGTATAT TATCTGATGG TTTTTTTCAC TCCGGTGAGC AATTGGGTGA AACGTTAGGC ATGAGTCGCG CTGCGATTAA TAAACACATG CAAACTATTA GAGATTGGGG TTTAGATGTT TTTACTGTCC CAGGTAAGGG CTACAGCTTA CCTACTTCTA TCCAATTGCT TGATGAACAA AAAATATTAA GTTATTTACC TACGGGTCAC GTAACAGTAT TACCCGTAGT CGATTCTACT AATCAATATT TATTGGATCG TATTACTGAA TTGAAATCAG GTGATGCGTG TGTTGCGGAA TATCAGCAAG CAGGACGAGG TCGGCGTGGG CGTCAATGGG TTTCTCCTTT TGGTGCTAAT CTTTATTTAT CAATGTATTG GCGGCTAGAG CAAGGTCCTG CTGCTGCAAT GGGATTAAGC TTGGTTGTTG GGATTGTTAT GGCAGAGGTT CTGCAGAATT TAGGTGCAGA GAAGGTTCGT GTTAAGTGGC CTAATGATCT GTATTTAAAT GATAAAAAGC TGGCCGGAAT ATTAGTAGAG CTTACTGGGA AAACGGGTGA TGCTGCACAA TTAGTCATTG GTGCAGGTAT TAACCTGACA ATGCGTGGTT CAGAAACAAA TGCTATTAAC CAAGATTGGA TAAATTTGCA GGATGCTGGT GTTACTATCG ATCGTAATAA ACTCACTGCT GAGATCTTAT CTGAATTACG GCTTGCAGTA GTTAAGTTCG AAAATGAGGG CTTATCGGCA TTCCTTTCTC GTTGGCAGAA AATGGATAAT TATCTTAATA GGCCAGTGAA ATTAATTATT GGTAATCAAG AGATTTTTGG TATTGCTCGC GGAATCGATC AGCAAGGCGC ATTATTATTA GAACAAGATG GCAATATAAA GCCTTATATT GGCGGTGAGA TATCCCTTCG AGGTGTCTGA
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Protein sequence | MKDIRVPLRL VSILSDGFFH SGEQLGETLG MSRAAINKHM QTIRDWGLDV FTVPGKGYSL PTSIQLLDEQ KILSYLPTGH VTVLPVVDST NQYLLDRITE LKSGDACVAE YQQAGRGRRG RQWVSPFGAN LYLSMYWRLE QGPAAAMGLS LVVGIVMAEV LQNLGAEKVR VKWPNDLYLN DKKLAGILVE LTGKTGDAAQ LVIGAGINLT MRGSETNAIN QDWINLQDAG VTIDRNKLTA EILSELRLAV VKFENEGLSA FLSRWQKMDN YLNRPVKLII GNQEIFGIAR GIDQQGALLL EQDGNIKPYI GGEISLRGV
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