| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3863 |
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| Symbol | rplA |
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| ID | 5388444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4355697 |
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| End bp | 4356401 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866888 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001402814 |
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| Protein GI | 153950449 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000000298725 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC TGACCAAGCG CATGCGCGTG ATCCGTGACA AAGTTGATGT TACTAAGCAA
TACGATATCA ACGAAGCTGT TGCTCTGCTG AAAGAGCTGG CTACTGCTAA ATTCGTAGAA
AGCGTGGACG TTGCCGTTAA CCTCGGTATC GATGCACGTA AATCTGACCA AAACGTTCGT
GGCGCGACTG TGTTGCCACA TGGTACTGGC CGTTCAGTAC GCGTTGCTGT TTTCGCTCAG
GGTGCAAATG CTGAAGCGGC GAAAGAAGCA GGCGCTGAAT TGGTAGGTAT GGACGATCTG
GCTGATCAGA TCAAGAAAGG CGAAATGAAC TTCGACGTCG TTATTGCTTC TCCAGATGCA
ATGCGCGTTG TTGGTCAATT GGGCCAAATC TTGGGTCCAC GTGGCCTGAT GCCTAACCCG
AAAGTGGGTA CCGTTACACC TAACGTTGCT GAAGCAGTTA AAAATGCTAA AGCAGGTCAG
GTTCGTTATC GTAATGATAA AAACGGTATT ATCCACACTA CCATTGGTAA AGTTGATTTC
GACTCAGATA AGTTGAAAGA GAACTTAGAA TCTCTGGTTG TTGCGCTGAA AAAGGCTAAG
CCTGCTACAG CGAAAGGCAT ATATATCAAG AAAATCAGCC TGTCCACTAC CATGGGTGCT
GGCGTTGCTA TTGATCAAAG CGGCCTGACT GCAGTAGTGA ACTAA
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| Protein sequence | MAKLTKRMRV IRDKVDVTKQ YDINEAVALL KELATAKFVE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG RSVRVAVFAQ GANAEAAKEA GAELVGMDDL ADQIKKGEMN FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DSDKLKENLE SLVVALKKAK PATAKGIYIK KISLSTTMGA GVAIDQSGLT AVVN
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