Gene YpsIP31758_3857 details

Gene Information

• Locus tag: YpsIP31758_3857
• Symbol: thiH
• ID: 5385738
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4343533
• End bp: 4344663
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640866882
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001402808
• Protein GI: 153948169
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 69
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAG ACTTCAACCA GCGCTGGCAG CAGTTGGACT GGGACGATAT CTCCTTAACC 
ATCAACAGTA AAAAACCCGC AGACGTTGAA CGGGCGCTGA ATGCCATCAA GCCCACCCGC 
GAAGATTTGA TGGCACTCAT TTCCCCTGCC GCACTGGCTT ACCTGGAGCC AATGGCACAG 
AAGGCCCAAC AACTGACACG CCAACGTTTT GGAAATACAG TCAGTTTTTA TGTGCCGCTT 
TATCTCTCCA ATTTGTGTGC TAATGATTGC ACTTACTGCG GCTTCTCGAT GAGTAATCGC 
ATCAAACGCA AGACATTGGA TGAAGCAGAG ATTATCCGAG AGTGTGAAGC TATCAAAGCG 
CTGGGTTTTG AGCACTTGCT GCTGGTCACT GGGGAGCACC AAACAAAAGT AGGAATGGAC 
TATTTTCGCC GCCACCTCCC TACGATCCGC AGTAGATTCA GTTCGCTAAT GATGGAGGTT 
CAGCCATTGG CAGAAGATGA ATATACTGAA TTAAAGGCGC TGGGATTAGA TGGCGTGATG 
GTTTATCAGG AAACCTATCA CCCAGCGACG TATCAGCAGC ACCATTTGCG GGGTCATAAG 
CAGGATTTTC ACTGGCGGTT GGCAACCCCA GATCGTTTGG GCCGTGCGGG GATCGACAAG 
ATCGGATTGG GTGCCTTGAT TGGCTTGTCC AATAGTTGGC GTACCGACTG TTATATGCTG 
GCGGAGCATC TGTTTTATTT GCAACAAACT TACTGGCAAA CCCGTTATTC GATCTCTTTC 
CCTCGCTTGC GTCCGTGCGC TGGGGGGATC GAACCCGCAT CCATCATGAG TGAGCCACAA 
CTGCTGCAAC TGATCTGCGC TTTTCGCTTA TTTGCACCTG ATGTGGAACT GTCGTTATCT 
ACTCGAGAAT CGCCTTTCTT CCGCGATAAT GTCATTCCGG TTGCTATCAA TAATGTCAGT 
GCCGGGTCAA AAACCCAACC GGGGGGTTAT GCCGATGATC ATCCCGAACT GGAACAATTT 
GCGCCCCATG ATAACCGCTC CCCGGAACAG GTCGCACAAG CGTTAACAAA AGCAGGCTTA 
CAGCCCGTGT GGAAAGATTG GGATAGCCAT TTAGGCCGTT CATTGCGATA A 

 

Protein sequence

MSEDFNQRWQ QLDWDDISLT INSKKPADVE RALNAIKPTR EDLMALISPA ALAYLEPMAQ 
KAQQLTRQRF GNTVSFYVPL YLSNLCANDC TYCGFSMSNR IKRKTLDEAE IIRECEAIKA 
LGFEHLLLVT GEHQTKVGMD YFRRHLPTIR SRFSSLMMEV QPLAEDEYTE LKALGLDGVM 
VYQETYHPAT YQQHHLRGHK QDFHWRLATP DRLGRAGIDK IGLGALIGLS NSWRTDCYML 
AEHLFYLQQT YWQTRYSISF PRLRPCAGGI EPASIMSEPQ LLQLICAFRL FAPDVELSLS 
TRESPFFRDN VIPVAINNVS AGSKTQPGGY ADDHPELEQF APHDNRSPEQ VAQALTKAGL 
QPVWKDWDSH LGRSLR