Gene YpsIP31758_3854 details

Gene Information

• Locus tag: YpsIP31758_3854
• Symbol: thiE
• ID: 5386729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4341077
• End bp: 4341724
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640866879
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_001402805
• Protein GI: 153948968
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 76
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTACAC CAGGTTTCCC CTCCACGGAA CAGCGTCTTG GGCTCTACCC AGTGGTGGAC 
TCATTATTAT GGATAGAACG CCTGCTGGCA GCCGGAGTCA CGACGCTACA ACTGCGCATT 
AAAAATGCAG ACGATGCTCA GGTGGAGCAA GATATTGTCG CGGCCATTGA ATTAGGAAAA 
CGCTATCAGG CGCGCTTATT TATCAATGAT TACTGGCAGT TGGCGGTTAA ACACGGCGCT 
TATGGCGTTC ATCTCGGTCA GGAAGATCTG GAAACCGCTG ATTTAGCGGC AATTCAGCAA 
GCGGGGTTAC GGCTCGGCAT TTCTACCCAT GATGAACATG AGTTGGCGGT GGCAAAAACA 
CTGCGCCCCT CTTATATCGC GCTGGGGCAT ATTTTCCCTA CTCAGACCAA ACAGATGCCG 
TCATCCCCAC AGGGGTTGGC GTCTTTAAGC CGTCAGGTGA AGAATACGCC GGATTACCCA 
ACCGTGGCTA TCGGTGGCAT CAGTATTGAG CGGGTGCCAC ACGTATTAGC AACTGGCGTC 
GGCAGTGTCG CCGTGGTCAG CGCCATTACG TTGGCAAGTG ACTGGCAACG GGCAACCGCA 
CAATTACTGC ACCTGATCGA GGGTAAGGAG CTGGCTGATG AAAAATGA 

 

Protein sequence

MATPGFPSTE QRLGLYPVVD SLLWIERLLA AGVTTLQLRI KNADDAQVEQ DIVAAIELGK 
RYQARLFIND YWQLAVKHGA YGVHLGQEDL ETADLAAIQQ AGLRLGISTH DEHELAVAKT 
LRPSYIALGH IFPTQTKQMP SSPQGLASLS RQVKNTPDYP TVAIGGISIE RVPHVLATGV 
GSVAVVSAIT LASDWQRATA QLLHLIEGKE LADEK