Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3851 |
Symbol | nudC |
ID | 5385862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4337255 |
End bp | 4338037 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640866876 |
Product | NADH pyrophosphatase |
Protein accession | YP_001402802 |
Protein GI | 153948704 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTAC AACTTACAGG TAAAGAAAGT GGCTGGTGGA TTGTCAGTCA TGAAAATAAA TTATGGTTGC CGAAGGGAGA GCTACCACAA GGCAATGCCG CTAATTGGTC ACTGCAAGGC GCGACTGCAC GGCAGATTGG TGAATGGCAA GGGCAGCCTG TGTGGCTTAT TCGCCAGATG ATGCCTTCAG GGATGGGGTC GGTCCGGCAA TTATTGGATG TTGACCGCGG TTTATTTCAG TTGGCAGGGC GCGGCGTGCA ATTAGCCGAA TTCTATCGTT CACATCGCTT TTGTGGCTAT TGTGGGCATG AAATGCATGC CAGCCGGACG GAATGGGCCA GCTTATGTAA CCACTGCCGG GAGCGCTATT ATCCGCAAAT TGCCCCCTGT GTGATTGTTG CTATTCGCCG TGGTGATGAA ATTTTGCTGG CACAACATGT GCGCCATCGT GGCGGTATCA ATACCGTGCT GGCGGGGTTT GTTGAAGTGG GGGAGACCCT GGAACAGGCG GTTTCACGGG AAGTGTTGGA AGAAAGTAAT ATTCACATTA AGAACCTGCG CTACGTGACG TCACAGCCTT GGCCATTTCC TCATTCACTG ATGATGGCAT TTATGGCGGA TTATGACAGC GGTGAATTAT GTCATGACCC GAAAGAGTTG CTGAATGCCG GCTGGTATCG CTATGACCAA TTACCTTTGC TACCTCCACC CGGTACCGTG GCACGCCGTC TGATTGAAGA TACGGTGGTC TTATGTCGTG AACATAGCGA TTTAAGCCAA TAG
|
Protein sequence | MELQLTGKES GWWIVSHENK LWLPKGELPQ GNAANWSLQG ATARQIGEWQ GQPVWLIRQM MPSGMGSVRQ LLDVDRGLFQ LAGRGVQLAE FYRSHRFCGY CGHEMHASRT EWASLCNHCR ERYYPQIAPC VIVAIRRGDE ILLAQHVRHR GGINTVLAGF VEVGETLEQA VSREVLEESN IHIKNLRYVT SQPWPFPHSL MMAFMADYDS GELCHDPKEL LNAGWYRYDQ LPLLPPPGTV ARRLIEDTVV LCREHSDLSQ
|
| |