Gene YpsIP31758_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3849 
SymbolhemE 
ID5386457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4335191 
End bp4336258 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID640866874 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001402800 
Protein GI153950025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGT TGAAAAACGA TCGCTATCTG CGTGCTTTGC TACGTCAGCC TGTAGACATG 
ACACCGGTAT GGATGATGCG GCAGGCAGGC CGTTATTTGC CAGAATATAA AGCAACCCGC
GCTATTGCTG GGGATTTTAT GTCACTGTGC AAAAATGCAG AGTTAGCCTG TGAGGTCACG
ATGCAGCCAC TGCGTCGTTA TCCGCTGGAT GCAGCGATTC TGTTTTCCGA CATTCTGACC
ATCCCTGATG CCATGGGGCT GGGGCTCTAT TTTGAAACTG GCGAAGGCCC GCGTTTTCAA
TCCCCAATTA CTTGCCGGGC TGATGTTGAA AAATTGCCGA TCCCCGATCC TGAGCAAGAA
TTGGGTTATG TGATGAATGC GGTGCGGACC ATTCGTCGCG AACTGGCCGG TTCGGTGCCC
TTAATCGGTT TTTCCGGTAG CCCATGGACT CTGGCGACCT ATATGGTTGA AGGCGGCAGT
AGTAAAGCCT TTACCAAACT GAAAAAAATG ATGTATGCCG AACCGCAGAC CTTGCACTTG
CTGCTGGATA AACTGGCAGA CAGTGTCATT TTGTATCTTA ATGCCCAAAT CAAGGCGGGG
GCTCAATCGG TCATGATCTT TGATACTTGG GGGGGGGTAC TGACAGGCCG TGATTATCAT
GAGTTCTCAT TGAATTATAT GCATAAAATT GTCGATGGTT TGATCCGCGA AAATGAAGGT
CGTCGGGTTC CGGTCACTTT GTTCACCAAG GGCGGGGGGC AGTGGCTGGA AGCGATGGCC
GCCACCGGTT GTGATGCGCT GGGTCTAGAC TGGACAACGG ATATCGCGGA TGCACGTCGT
CGTGTTGGTG ATAAAGTTGC CTTGCAAGGC AACATGGATC CTTCGGTTCT GTATGCACCC
CCTGCGCGTA TTGAGCAGGA GGTTAGTACC ATTCTGGCGA GCTTTGGCCA GGGTGAAGGG
CATGTGTTTA ATCTGGGCCA CGGGATTCAT CAAGATGTAC CGCCAGCACA TGCCGGTGCA
TTTGTGAACG CGGTACATGC GCTATCACGG CCTTATCATC AAAAATAA
 
Protein sequence
MNELKNDRYL RALLRQPVDM TPVWMMRQAG RYLPEYKATR AIAGDFMSLC KNAELACEVT 
MQPLRRYPLD AAILFSDILT IPDAMGLGLY FETGEGPRFQ SPITCRADVE KLPIPDPEQE
LGYVMNAVRT IRRELAGSVP LIGFSGSPWT LATYMVEGGS SKAFTKLKKM MYAEPQTLHL
LLDKLADSVI LYLNAQIKAG AQSVMIFDTW GGVLTGRDYH EFSLNYMHKI VDGLIRENEG
RRVPVTLFTK GGGQWLEAMA ATGCDALGLD WTTDIADARR RVGDKVALQG NMDPSVLYAP
PARIEQEVST ILASFGQGEG HVFNLGHGIH QDVPPAHAGA FVNAVHALSR PYHQK