| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3843 |
|---|
| Symbol | purH |
|---|
| ID | 5386555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4329535 |
|---|
| End bp | 4331124 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640866868 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001402794 |
|---|
| Protein GI | 153949966 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000000026179 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC GCCGTCCAAT CCGCCGTGCT CTACTCAGTG TGTCTGACAA AGCAGGTATC
ATCGAATTCG CCCAAGCACT TTCTCAACGC GGTATCGAGT TACTTTCCAC CGGTGGGACT
GCCCGCCTGC TGGCTGATGC TGGTTTACCC GTTACCGAAG TGTCTGACTA CACCGGCTTC
CCGGAAATGA TGGATGGACG TGTGAAGACT TTGCATCCAA AGGTGCATGG TGGGATTTTA
GGTCGTCGTG GCCAAGATGA TGGCATTATG GCTCAACATG GCATTCAACC AATTGATATT
GTCGTCGTTA ATTTATATCC CTTCGCCCAG ACGGTTGCCC GCCCGGATTG CTCGCTGGAA
GATGCGGTTG AGAATATTGA TATTGGTGGC CCAACCATGG TTCGCTCTGC GGCCAAGAAC
CATAAAGATG TCGCCATCGT GGTGAAGAGT AGCGACTACC CCGCCATTAT TACTGAGCTT
GATAATAATG ATGGTTCGTT GACTTACCCC ACCCGTTTCA ATCTGGCCAT TAAAGCTTTC
GAACACACCG CCGCCTATGA CAGCATGATC GCCAACTACT TCGGTACGCT GGTGCCACCT
TATCATGGTG ATACGGAACA GCCTTCCGGC CACTTCCCTC GCACCCTAAA TCTTAACTAT
ATAAAGAAGC AGGATATGCG TTACGGTGAA AACAGCCACC AGCAAGCTGC CTTCTATATA
GAAGAAGATG TCAAAGAGGC ATCCGTTGCC ACTGCCCAGC AATTACAAGG GAAAGCCCTC
TCTTATAACA ATATTGCGGA TACCGATGCC GCGCTGGAAT GCGTGAAAGA GTTCAGTGAA
CCAGCCTGTG TGATCGTTAA ACATGCCAAC CCATGCGGTG TGGCTATCGG TGATTCTATT
CTTGCCGCTT ATGAACGTGC CTATCAAACC GATCCAACCT CAGCTTTCGG TGGCATCATC
GCCTTTAACC GTGAATTGGA TGCAGCAACG GCCAGCGCGA TCATCAGCCG CCAGTTTGTC
GAAGTGATCA TTGCGCCAAC AGTCAGCTCT GATGCATTGG CATTGCTTGC AGCTAAACAA
AATGTCCGAG TCCTGACTTG TGGCCAGTGG CAAGCACGTT CAGCAGGTTT AGATTTCAAA
CGTGTTAATG GGGGTTTGCT GGTACAAGAA CGCGATTTAG GTATGGTGAC GGCGGCCGAC
CTTCGCGTGG TTTCCAAGCG TCAGCCTACC GAACAGGAAC TGCGTGATGC GCTGTTCTGC
TGGAAAGTGG CTAAGTTTGT TAAATCCAAT GCGATTGTCT ATGCCCGCGA TAACATGACA
ATCGGTATAG GTGCCGGCCA AATGAGCCGC GTGTACTCTG CGAAAATAGC CGGTATCAAG
GCCGCAGATG AAGGGCTGGA AGTGGCTGGC TCAGCCATGG CCTCTGATGC CTTCTTCCCG
TTCCGTGATG GTATTGATGC CGCCGCGGCT GTGGGCATTA CTTGTGTCAT CCAACCGGGC
GGCTCAATTC GTGATGATGA AGTCATCGCG GCTGCTGATG AACACAGTAT TGCCATGATC
TTCACCGACA TGCGCCATTT CCGTCATTAA
|
|---|
| Protein sequence | MQQRRPIRRA LLSVSDKAGI IEFAQALSQR GIELLSTGGT ARLLADAGLP VTEVSDYTGF
PEMMDGRVKT LHPKVHGGIL GRRGQDDGIM AQHGIQPIDI VVVNLYPFAQ TVARPDCSLE
DAVENIDIGG PTMVRSAAKN HKDVAIVVKS SDYPAIITEL DNNDGSLTYP TRFNLAIKAF
EHTAAYDSMI ANYFGTLVPP YHGDTEQPSG HFPRTLNLNY IKKQDMRYGE NSHQQAAFYI
EEDVKEASVA TAQQLQGKAL SYNNIADTDA ALECVKEFSE PACVIVKHAN PCGVAIGDSI
LAAYERAYQT DPTSAFGGII AFNRELDAAT ASAIISRQFV EVIIAPTVSS DALALLAAKQ
NVRVLTCGQW QARSAGLDFK RVNGGLLVQE RDLGMVTAAD LRVVSKRQPT EQELRDALFC
WKVAKFVKSN AIVYARDNMT IGIGAGQMSR VYSAKIAGIK AADEGLEVAG SAMASDAFFP
FRDGIDAAAA VGITCVIQPG GSIRDDEVIA AADEHSIAMI FTDMRHFRH
|
|---|
| |