| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3832 |
|---|
| Symbol | |
|---|
| ID | 5388190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4311670 |
|---|
| End bp | 4314489 |
|---|
| Gene Length | 2820 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640866856 |
|---|
| Product | putative sensor histidine kinase/response regulator EsrA |
|---|
| Protein accession | YP_001402786 |
|---|
| Protein GI | 153950420 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAG CATCATCACT TGTCACTCGA TTGACATTAT TACTGGGCGT CACACTAACC
GTTATTTGGT TAATATTAAT CGCAACAACA GCATTCTTTT CATATGAAAA TACACGTCAA
ATATTAATCA ATGAGTTAAC ACATATGGCA TCGATGCGGG CAGACTTAAG TAATCACCAG
TTTGAAGGAG CTGAACGTGA TGCAGCCTCG TTAATAAGCC GACGAGAAAG CCTCCAGAGC
ACCTCACCGT TGCCTGAAAT ATCGATAAAA CATTATGATA GCTGCTATAT TCCTTTTAAT
CTGGACAGCT GTAATATTAA CCAACATAAA AATGATCTGT GGATAATTCA AGCGTATGGC
ACCGCCGGGC AAACTTATTA TCTCGACAGT TTTATTATCA AACAAAAAGA GGGGATTGTG
TTATTCCCAC CCCAAAAATC ATCGAGTGAT TACCTAAATC AACGGCGCAA AGATTTACTT
TTGCTCCCCA AATTCCCTAC TCACAATAAT ATCTATTGGG GAGCCCCCAC CTATACGCCT
CAAGGTGGCT GGCATGTTTC TGTCGCGGTG TGTGATAAAG TGGGCACCTT GGCTGGCTTC
GCCTTAAAAC TGAATGATCT CATCGCCTAT AATCACCCTG TCGAGCAAAG AGACATTAAT
TTATTGTTGG ATAAGAATGG TGAATTATTA CCTATTTCCC AGCAAGCAAC ATCATCAAAT
CAACTACATG AAATTCTTAA CCAACTCAAA AACAGTAAAT TACACGATGG CTGGCAGCAA
ACTCCCGACT ATTTGGTATT ACGCACCCAA TTGAAAGGGC CGGGTTGGCA GCAATTAGTT
ATTTATCCAC GAATAGGCTT TGCCTGGGAG GCACTGAAAC CCGCCTTATA TCAACTCCCT
TTCGCTCTGG TTATTTTGCT GTTACTCACG TCAGTGCTGT CACTGCTGCT GCGATATTAT
CTGGCGATCC CTTTGTGGAA TTTCATCAAT ATCATTGGCG CTACCGGGCC ACAGGCAATG
GAACCCCGAC TTCCCATAAA CCGAATAGAT GAATTAGGGC ATATTGCCCG CGCTTACAAT
AACTTACTGG ATACGTTGAA CGAACAATAT GACACCTTAG AAATGAAAGT GAAGGAGCGT
ACTCTGGCTC TGGCAAAAGC CAAACGAGCT GCTGAGCAGG CTAACCGCCG TAAAAGCGAC
CATCTAACCA CGATCAGCCA TGAAATCCGT ACACCGCTCA ACGGGGCGTT GGGGGCGGTT
GAATTATTAC AAAATACACC ACTGGATGCT GGCCAAATGA GGTTAGCGGA AACGGCCCAC
CAATGTTCGT TATCACTGCT CGCGATCATT AACAACCTGT TAGATTTTTC ACGTATTGAA
TCAGGGCAAA TGACACTGTC GCTGAAGAAA ACGGCCCTAC TGCCTTTACT GGATCAGGCG
ATGTTAACCA TTCATAGCCA GGCACTGAGT AAGTCATTAG CGCTGTCCAC GTTTATCAGT
GCCGATATCC CGCTGGAACT TGAGCTGGAT ACACTGCGCT TAAGACAGAT TCTGGTTAAT
TTATTAGGTA ATGCCGTTAA ATTCACACCA CAGGGCCGTA TTCAACTCAG GGTCAGGCGT
CAAAACCAAA CGCTTTGTTT TACCGTTGAG GACACCGGTT GTGGTATTGA CGTGCAACAT
CAACAAACAA TATTCCAACC ATTTATGCAG ACCAGTGACC ATGAACAAGG AACGGGTCTG
GGGCTGGCTA TCGCAGATAA TCTGGCCAAA ATGATGGGGG GCCACCTGAC AGTATTCAGT
GAACCGGGTC AAGGTAGCTG TTTTTCATTA TGTCTCCCCT TCAATGCAAT CACCCCGCCA
ATACCTTTTC ATGGCGAGCT ATTCGCACCA CAACGCTTAC ATGCCCAATT ATCAGCCTGG
GGCATGACCT GCCAGCCAGA ATTAACTAAT CAGCCATCAC GGCACTTTGT GGATAACGCA
TTGTGTTACT TACCCGGCCG GTTATACACC AACCTGAAGC AATATCTACA AGGTGCTGAG
ACTGAGGCGC TAAAGAGCCT TCCGCTGCAA CCTTGGCAGA TGCACATTCT GCTGGTTGAT
GACTCCGAAA CGAATCGCGA TATTACCGGA ATGATGTTGC AGCAACTGGG GCATCAGGTC
ACGCGGGCAG ACAGTGGCAC AACCGCATTG GCGATTGGCC GCCAGCATCG TTTCGATTTA
GTGCTAATGG ATATTCGAAT GCCTGTTCTG GACGGGCTGG CCACCACGGC ACGCTGGCGT
CATGATCCGG CGAACATTGA TAGCCACTGC ATGATCACCG CCCTGAGCGC CAATGCCAGC
CCGGATGAGC AAATCAAAAC CAATCAGGCG GGGATGAACC ACTACCTTTC CAAGCCTGTC
ACCCTCGGCC AATTGGCTGA AATGTTAGAT CTGACCGCAC AATTCCAACT TGAGCGTGGG
GTCGATCTAT CGCCACAACT CTCCGAGCCT CAGCCATTAC TGGATCTCGC GGATAGCGCG
TTGTCCCTGA AACTTTATCA ATCACTGCAA GTATTAATTC AACAGGCCAA AGACGCTATT
GAGAACTTGC CCGTATTATC CCATACGCTT CACACCATAA AAGGCTGTGC CGGGCAAGCT
GGGCTAATTG AATTACAAGA TGCGGTCATT CAATTAGAAC ACGCTCTCGA TACTCATGAA
ACGCTGACAC AGCAAGATAT CATTCACCTT GATGAAATAA TTCATGTGCT GCTACAGCCA
CCCACTACAT GCGAATCCAC GTTTATCATC AGCCAGGGCC AGTCCCTTAT GGTTAAATAA
|
|---|
| Protein sequence | MGKASSLVTR LTLLLGVTLT VIWLILIATT AFFSYENTRQ ILINELTHMA SMRADLSNHQ
FEGAERDAAS LISRRESLQS TSPLPEISIK HYDSCYIPFN LDSCNINQHK NDLWIIQAYG
TAGQTYYLDS FIIKQKEGIV LFPPQKSSSD YLNQRRKDLL LLPKFPTHNN IYWGAPTYTP
QGGWHVSVAV CDKVGTLAGF ALKLNDLIAY NHPVEQRDIN LLLDKNGELL PISQQATSSN
QLHEILNQLK NSKLHDGWQQ TPDYLVLRTQ LKGPGWQQLV IYPRIGFAWE ALKPALYQLP
FALVILLLLT SVLSLLLRYY LAIPLWNFIN IIGATGPQAM EPRLPINRID ELGHIARAYN
NLLDTLNEQY DTLEMKVKER TLALAKAKRA AEQANRRKSD HLTTISHEIR TPLNGALGAV
ELLQNTPLDA GQMRLAETAH QCSLSLLAII NNLLDFSRIE SGQMTLSLKK TALLPLLDQA
MLTIHSQALS KSLALSTFIS ADIPLELELD TLRLRQILVN LLGNAVKFTP QGRIQLRVRR
QNQTLCFTVE DTGCGIDVQH QQTIFQPFMQ TSDHEQGTGL GLAIADNLAK MMGGHLTVFS
EPGQGSCFSL CLPFNAITPP IPFHGELFAP QRLHAQLSAW GMTCQPELTN QPSRHFVDNA
LCYLPGRLYT NLKQYLQGAE TEALKSLPLQ PWQMHILLVD DSETNRDITG MMLQQLGHQV
TRADSGTTAL AIGRQHRFDL VLMDIRMPVL DGLATTARWR HDPANIDSHC MITALSANAS
PDEQIKTNQA GMNHYLSKPV TLGQLAEMLD LTAQFQLERG VDLSPQLSEP QPLLDLADSA
LSLKLYQSLQ VLIQQAKDAI ENLPVLSHTL HTIKGCAGQA GLIELQDAVI QLEHALDTHE
TLTQQDIIHL DEIIHVLLQP PTTCESTFII SQGQSLMVK
|
|---|
| |