Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3827 |
Symbol | |
ID | 5384389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4307656 |
End bp | 4308363 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640866851 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001402781 |
Protein GI | 153948421 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTCAA TACAGTTTAT TTTATTTCGG CAAGAGGGCG TATTACGCAG TGATGGCGAG CGCTATGTTA TACCTGCGGG AAAATTAGTG ATTGCCGATG AGCAGGCCAG TGCCTCTGCG TTTGCAAACA GTGCCATCAC CTCTATATTA TGTTACCCAA TAGATCTTTT TCCGATATAT CAGGATTTAG CCAGAAGAAC ATTACCGTTG AATAAAGGCC ATCTTCCTCA TGCGGTAAAT GATAAATATA AAGTGTTGCC AGCGAATGTT GAAATTATAC AAGCCGCTGA AGAATTAATT AATATAGAGC GTGTTGCCTC TTTGCGATTT CTTTATCTTT ATTGTTTAGG TATCGATAAC GTTTATTTTT CCAAGCTGTT GGACTCCATT GTGGGTACGA ATAACGAACT ACTTGAGTTT TTCGAAAAGA ATCGGCTCAA CCCATGGAGC GTTTCACGCT ATGCCAATGA ATTGGGTATT TCGACCCGGA AATTGAATTT CCTGTTTTAT GAGAAATTCG GCATGTCGGC GAAACAGTGG TTACTGGATC AGCGTTTGAA AAAGGGCTGT GAGCTATTAC TTTCGACCCG CTTACGGGTG GCTGATATTG CCATGGAGTG TGGTTTTAGT AATCACGCGC ATTTCTCAGA TAGCTTTCGT CGGCGCTTTC AACAATGCCC ATCGCATATG CGTTCACTTA TTGAATAG
|
Protein sequence | MKSIQFILFR QEGVLRSDGE RYVIPAGKLV IADEQASASA FANSAITSIL CYPIDLFPIY QDLARRTLPL NKGHLPHAVN DKYKVLPANV EIIQAAEELI NIERVASLRF LYLYCLGIDN VYFSKLLDSI VGTNNELLEF FEKNRLNPWS VSRYANELGI STRKLNFLFY EKFGMSAKQW LLDQRLKKGC ELLLSTRLRV ADIAMECGFS NHAHFSDSFR RRFQQCPSHM RSLIE
|
| |