| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3818 |
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| Symbol | |
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| ID | 5384612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4301312 |
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| End bp | 4302649 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640866842 |
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| Product | type III secretion system ATPase |
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| Protein accession | YP_001402772 |
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| Protein GI | 153948731 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC CTGATATCGC GCGGTTAACC CCCCGCCTGC AACAACAACT CACGCGACCG
TCGGCACCAC CGGAGGGCTT GCGTTACCGT GGGCCGATTG TGGAGATTGG GCCGACCTTG
TTACGAGCCA GCCTACCCAA TGTGGCGCAG GGTGAATTAT GCCGCATTGA ACCGCAAGGG
ATGTTAGCTG AAGTGGTATC GATTGAGCAG GAAATGGCCT TGTTATCCCC CTTTGCCTCT
TCAGATGGCC TGCGTTGTGG GCAATGGGTG ACGCCACTTG GACACATGCA CCGGGTACAG
GTGGGGGCTG ATTTGGCCGG GCGGATCTTG GATGGCCTAG GTGCTCCGAT AGACGGCGGC
CCCCCGCTGA CGGGGCAGTG GCGTGAACTG GATTGCCCCC CGCCTAGCCC ATTAACCCGC
CAGCCGGTAG AGCAAATGCT GACCACCGGG GTCCGCGCGA TTGATGGGAT ATTGAGCTGT
GGCGAGGGCC AGCGTATTGG TATTTTTGCC GCCGCTGGCG TTGGGAAAAG TACTTTATTG
AGCATGTTAT GTGCTGATAG TGCGGCCGAT GTGATGGTGC TGGCACTGAT TGGTGAGCGT
GGGCGGGAGG TGCGCGAATT TCTTGAACAG GTGCTGACTC CGGAGGCGCG TGCGCGCACC
GTGGTGGTGG TGGCGACCTC TGACCGGCCA GCATTGGAGC GGTTGAAGGG GCTGTCTACT
GCCACCACGG TGGCGGAGTA TTTTCGCGAA CGTGGATTGA AGGTGTTGTT ACTGGCGGAT
TCACTGACCC GCTATGCCCG TGCCGCCCGT GAAATTGGTC TGGCGGCAGG CGAGCCACCG
GCTGCTGGCA GTTTCCCCCC AAGTGTTTTT GCCAACTTAC CCCGCCTGTT GGAGCGAACG
GGTAACAGTG ATCGCGGCAG CATTACGGCT TTTTATACCG TGCTGGTGGA GGGAGATGAC
ATGAATGAAC CGGTGGCCGA TGAAGTGCGT TCGCTGTTGG ATGGGCACAT CGTTTTATCA
CGACGGTTGG CCGGTGCCGG GCATTATCCG GCGATTGATA TTGCCGCCAG CGTCAGCCGT
ATCATGCCGC AAATCGTCAG TGCCGGGCAG TTGGCGATGG CACAAAAACT ACGGCGAATG
CTGGCCTGTT ATCAGGAGAT CGAGCTGTTG GTGCAGATTG GTGAATATCA GGCAGGAGAA
GACCTACAGG CTGATGAAGC CTTACAACGC TATCCGGCAA TATGCGCCTT TTTACAACAA
GACCACAGCC TAACGCGTGA CCCAGATACT GCTCATCTTG ATACCACTCT GGAACACCTG
GCGCAGGTTG TCGGTTGA
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| Protein sequence | MKLPDIARLT PRLQQQLTRP SAPPEGLRYR GPIVEIGPTL LRASLPNVAQ GELCRIEPQG
MLAEVVSIEQ EMALLSPFAS SDGLRCGQWV TPLGHMHRVQ VGADLAGRIL DGLGAPIDGG
PPLTGQWREL DCPPPSPLTR QPVEQMLTTG VRAIDGILSC GEGQRIGIFA AAGVGKSTLL
SMLCADSAAD VMVLALIGER GREVREFLEQ VLTPEARART VVVVATSDRP ALERLKGLST
ATTVAEYFRE RGLKVLLLAD SLTRYARAAR EIGLAAGEPP AAGSFPPSVF ANLPRLLERT
GNSDRGSITA FYTVLVEGDD MNEPVADEVR SLLDGHIVLS RRLAGAGHYP AIDIAASVSR
IMPQIVSAGQ LAMAQKLRRM LACYQEIELL VQIGEYQAGE DLQADEALQR YPAICAFLQQ
DHSLTRDPDT AHLDTTLEHL AQVVG
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