| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3811 |
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| Symbol | |
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| ID | 5386005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4296675 |
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| End bp | 4297745 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866835 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_001402765 |
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| Protein GI | 153948750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCCA CTGAAAAGAA TGAAAAACCC ACGCCCAAGC GCCTTAAGGA AGCCAAAGAA
AAAGGGCAGG TAGTCAAAAG TGTTGAGATA ACCTCCGGCG TACAGTTGGT GGCGCTGGTT
ATCTACTTTT TACTGACAGG ATATAGCTTG GTCGAGCAGG CTAAAGCCCT TATCCGCAGT
TCAATCATAC AATTACAGCA ACCACTTACT CTGGCTTTAG CCCGTATCGG TGCCGAGTGC
ATGACGGTAT TGATGCATAT CGTGGTGGTC TTGGGCGGGG CGCTGATCGT GGTCACCATT
ATTGCCGGTA TTGCTCAGGT TGGGCCGTTG TTGGCGACCA AAGCGGTGTC GTTTAAAGGT
GAGCGAATTA ACCCCATTCA AAATGCTAAA CAACTTTTCT CATTGCGCAG CGTGTTTGAG
CTGATGAAAT CATTATTGAA AGTGGGGGTG CTAACGCTGA TTTTTGGTTA CTTATTGATG
CAGTATGCGC CCTCTTTTGG TTATTTGACC CACTGTGGCA GTCGCTGTGC TCTCCCGGTC
TTTTCGACAC TAATGGGGTG GTTATTAGGC TCACTGATTG CCTGCTATCT GGTTTTTTCA
TTGATGGATT ATACTTTTCA GCGCTATACC ATCATGAAAC AACTGAAAAT GTCCCATGAT
GAGGTCAAGC GGGAGCATAA AGACAGTAAT GGGGATCCGC ACATTAAGCA GAAGCGGCGG
CAGCTACAGC ATGAAGTACA AAGTGGTAGT TTTGCCACTA ACGTGCGGCG TTCCACTGCG
GTAGTCCGTA ACCCGACACA TTTTGCCGTT TGTCTGGTTT ATCACCCAGA AGAGACGCCG
CTACCGATAG TGATTGAAAA AGGTCATGAT GAGCAGGCTG CATTGATTGT GAGCCTCGCA
GAGCAGAGCG GTATCCCTGT GGTAGAAAAC ATTGCGCTGG CGCGCGCATT ACACCGTGAT
GTTGCTTGTG GTGACACCAT CCCAGAACAA TTCTTCGAGC CAGTTGCTGC GCTCTTACGT
ATGGCACTGG AGTTGGATTA TCAGCCATCA AGTGATGATC CACCGCGCTA G
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| Protein sequence | MMSTEKNEKP TPKRLKEAKE KGQVVKSVEI TSGVQLVALV IYFLLTGYSL VEQAKALIRS
SIIQLQQPLT LALARIGAEC MTVLMHIVVV LGGALIVVTI IAGIAQVGPL LATKAVSFKG
ERINPIQNAK QLFSLRSVFE LMKSLLKVGV LTLIFGYLLM QYAPSFGYLT HCGSRCALPV
FSTLMGWLLG SLIACYLVFS LMDYTFQRYT IMKQLKMSHD EVKREHKDSN GDPHIKQKRR
QLQHEVQSGS FATNVRRSTA VVRNPTHFAV CLVYHPEETP LPIVIEKGHD EQAALIVSLA
EQSGIPVVEN IALARALHRD VACGDTIPEQ FFEPVAALLR MALELDYQPS SDDPPR
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