| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3798 |
|---|
| Symbol | |
|---|
| ID | 5388277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4283459 |
|---|
| End bp | 4284022 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640866822 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001402752 |
|---|
| Protein GI | 284988614 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3721] Putative heme iron utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0255184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGT CATCGTCTAT AAATACATCG TCCTCTATGA ATAGATCGTC CTCTATGAAT
AGATCGCCAC TGGCTGAATT CCTTGCCACC CAACCGGATG GCACCTTGGA ACAGATTGCA
CAGGATTACC AGGTCAGCGT ACTTGATGTT GTGCGTGCCT TACCTGAACG AGTCTTGGTA
GGCGCAGAGC ATTTTGATCG TATATGGGAC AGCATGACCG AGTGGGGGGA TGTCACGACC
TTAGTCCATA CCGCCGACGT GATTTTGGAA CACAAAGGCC CACTACCGAG CGGGACTCAC
CGCCATGGCT ATTTCAATTT ACGCAGTAAA CAAGGCCTCA GTGGCCATAT CAGAGCACAA
AATTGCCAGG CAATCGCCCT GCTGGAACGC CCATTTATGG GAATGGCAAC AGCGTCAGTA
CAGTTTTTCA ATCAACAGGG TGAAGTGATG TTTAAAGTCT ATGTTGGCCG TGATGAACAT
CGTCAATTAC GTGCTGATGG CCTTGCCGCA TTCCATCAAT TGGCTCAACA GCTCCTGATT
GAAGACCCGA CCCTGGTTAA ATAA
|
|---|
| Protein sequence | MNTSSSINTS SSMNRSSSMN RSPLAEFLAT QPDGTLEQIA QDYQVSVLDV VRALPERVLV
GAEHFDRIWD SMTEWGDVTT LVHTADVILE HKGPLPSGTH RHGYFNLRSK QGLSGHIRAQ
NCQAIALLER PFMGMATASV QFFNQQGEVM FKVYVGRDEH RQLRADGLAA FHQLAQQLLI
EDPTLVK
|
|---|
| |