| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3791 |
|---|
| Symbol | |
|---|
| ID | 5387078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4275836 |
|---|
| End bp | 4276972 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640866815 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001402745 |
|---|
| Protein GI | 153950234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0432048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAA CCCAACCGCC GGTTTATCGC CGGGAATTGT CAGGGGGCAC GTTGACGGTG
ATACCTAACA GTAGCAATAT CCCGCTGGAT TCGCTCTTTG ATATTGCCGA ACGCCGTAAC
CCTAAGCGCG CCTTCCTTTT TGTTAGCAAA GTTCTGGGGC GGCACATCCC TGTTAGCCCT
GCCACCATGC GCAATGTCTA TCGCCAATTG GCGGAGAGAT TTCCCGCAGA CCTACCAGGC
CCCGTTCTGT TTATTGGCAT GGCTGAAACT GCAGTAGGTC TGGCTGCTGG TGTATTTCAA
GAGCTACGCG GCACGGTCGC TGAACCGGTT TTTTTGACGT CAACCCGGCA TCCGGTTGAT
GGCGATTTGC TGTGCGAATT CAAAGAAAAC CATAGCCATG CAACGGATCA CCTGCTCTAT
TTGCCGTCTG ACCCCGTGTT GCGCGCACGC CTGCAACGCG CCCGTTCAGT GGTTCTTATT
GACGATGAGG CTACCACGGG GAACACCTTT ATCAACCTTC TTCAGGCATT ACGTGATGCC
AATCTGAATG GCCTTGAAAA GGTGGTTGCC GTCACCCTGA CCGACTGGAG CGGTAGCGCA
CTGACGGAAC GGTGCCCTTT GCCAGTCACC ACCGTTTCAC TTATCACCGG GGAGTGGAAC
TGGTCACCCA TCCCTGATGC CCCGGTGCCC GTGATGCCCG CCTGTAATGT CACTGCCCGT
GGCAAGGTTG CCATCACCGA TAAACAAAAT TGGGGCCGGC TCGGCATGGA TGAAACCCGT
GCTGATATCG GCCATAAGGT CCATGTACTG GCCGGTGAAA AAGTGCTGGT CCTTGGTACC
AGCGAGTTTG TCTGGCAACC TTTCTTATTG GCTGAGAGGC TGGAACATGC CGGGGCTAAC
GTCAAATTTA GCTCGATAAC CCGCTCACCG ATTGCACAAG GCCATGCTAT TAACTCAATC
ATCGCGTTCA GCGATAACTA CGGTCTAGGG ATCCCCAATT TCCTCTATAA CGTCGCTCAT
CAGCATTTTG ATCGCATTAT CGTTTGTGTC GAAACACCAG CCGAATCTAT TGATCCCACG
CTGATTGAAC AGCTTCGCAC GGTGGCACCT TGTGTGGAGG TTATTGCTTA TGAATAA
|
|---|
| Protein sequence | MMTTQPPVYR RELSGGTLTV IPNSSNIPLD SLFDIAERRN PKRAFLFVSK VLGRHIPVSP
ATMRNVYRQL AERFPADLPG PVLFIGMAET AVGLAAGVFQ ELRGTVAEPV FLTSTRHPVD
GDLLCEFKEN HSHATDHLLY LPSDPVLRAR LQRARSVVLI DDEATTGNTF INLLQALRDA
NLNGLEKVVA VTLTDWSGSA LTERCPLPVT TVSLITGEWN WSPIPDAPVP VMPACNVTAR
GKVAITDKQN WGRLGMDETR ADIGHKVHVL AGEKVLVLGT SEFVWQPFLL AERLEHAGAN
VKFSSITRSP IAQGHAINSI IAFSDNYGLG IPNFLYNVAH QHFDRIIVCV ETPAESIDPT
LIEQLRTVAP CVEVIAYE
|
|---|
| |