| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3781 |
|---|
| Symbol | |
|---|
| ID | 5388087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4264967 |
|---|
| End bp | 4265659 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640866805 |
|---|
| Product | putative periplasmic chaperone protein |
|---|
| Protein accession | YP_001402735 |
|---|
| Protein GI | 153947591 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGCG TCAATCGTTT TAACATCTTC TTTGTATTTA CGTTGTTGAT TTTATTGAGT
AGTTGGAGCG CAGTATCTTA CGCGTCGTTT AAATTAGAAA GCACGACGGT AATCTTGCAA
GAAAGTGAGG CTCGAACCAG TTTTACTATC GATAATATCT CTAGCAATCC AATACTGCTG
GTGACTAAAT TAACGGATTT GGACGGCAAA AGTTTCAGTA AGCAGATTTT GATTTCCCCC
CCGGTGACCC GTATTAATGC AGGGCAAAGC CAGCAAGTGA ATTTTGTCTT GAAGAAGGGG
AGCGTCTTGA ACAATGAAGT GTTGTTAAAA GCCTCTTTTG AAGGGGTTGA ACAGGTCCCC
GGTAATGCGG CGGTTATGCC AATTCGTCAG GAGATCGGCT TTCTGATCCA GCCGAGTGCT
GTGCCACAAA TTAGAATGCC GTGGCAAACG TTAGTTTTCT CCATATCGGG CAATAATTTG
GTTATTAAGA ATCCTGGTAA ACATGTGGTC CGCTTAGGGC CTCAGATTAT TTTAGTCCCA
AGTAATGAGG TGGTTGCACT GGGTAATCCT TATATTATGC CGGAGACTTC CAAACTGTTT
CCGATAACGT CATCACCCAC TGCCGTTAAA GTCACCCCGC TAAGCCGTTA TGGTTTTGTC
CAGACTGAAG TCACATTGCC GGTAACGCGT TAA
|
|---|
| Protein sequence | MNSVNRFNIF FVFTLLILLS SWSAVSYASF KLESTTVILQ ESEARTSFTI DNISSNPILL
VTKLTDLDGK SFSKQILISP PVTRINAGQS QQVNFVLKKG SVLNNEVLLK ASFEGVEQVP
GNAAVMPIRQ EIGFLIQPSA VPQIRMPWQT LVFSISGNNL VIKNPGKHVV RLGPQIILVP
SNEVVALGNP YIMPETSKLF PITSSPTAVK VTPLSRYGFV QTEVTLPVTR
|
|---|
| |