Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3776 |
Symbol | |
ID | 5384766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4259133 |
End bp | 4261190 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640866800 |
Product | putative oxidoreductase, FAD-binding |
Protein accession | YP_001402730 |
Protein GI | 153949239 |
COG category | [R] General function prediction only |
COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA TTGATAAAAA TGTCAGTACC TATGAAACGT TACAAAAGGG TTTTAATTTA CGTTGGCCAC CCAACGTTGA GCAGGGTGCT GAGACCATTT ATATCTGCAC GACACCCGAT GAAGTTTTTG CCGCCGCCAA TACTGCGCTA GCTGCAGGAA ATCGAATCAC GGTACGGAGT GGGGGGCACT GTTATGAGGG TTTTGTTTCC AACAAGTTAT CTACAGAGAG ATTGTCGATC ATTGATTTAG GCGAGATGAG CGGCCTGGAC TACGATGAAG ACAAAACGAT AACCTCACTT TGGGACGCGA ATAAAAATAC TTATCGCTTC AAGAGTCTGA CGGGGAATCA GAATTGGAAT GGCTATGTCT CACTCTACAA ACGGTCTGGC CGGACGATCC CCGGCGGGTC ATGTTACTCC GTGGGCGTGG GTGGGCACAT CAGCGGCGGT GGCTATGGAT TACTCTCACG TCTGCATGGG TTAACAGTGG ATTGGGTCAC TGGTGTTGAT ATTTTGGTGC CGGTCGGGAA CGCGCATCGG CTGGCATTTC GACATGTGCG CGCTGATAGT GTGTCTGAGG TAGACAGAGA GCTATTCATG GCTTGCTGTG GCGCTGGCGG TGGGAATTTC GGCATCATTA TCGCCTATTA TTTCGATGAT CTTCCCAAAG CACCTCAGAA AGCCTATTGG ATACCCCTAA CGTACCCATG GTCATCTTTA AAAGCGACAT TCCCCGCCTT TTTAAAAGCT TATTGGCAAT GGTTTGCTGA CAATGATGTT AATGCGACCA GTACGAAGGA GGGCGTCGGT AATGGCGGGT TATTTACTTT ACTGAAATTA AACCATATCG ATGCGTCCGA TAATGTCGTG TTGGCCATTC AATACACGGG TCCAAATGGT CAAGTCGGGG GCGCGAATGA TATTCCTCTC AATGACTTTA TCGAAAAAAT GAATGCCGCG GCTGGCATGA CACCGACGAT ATATGATGAT TTTATTTTGC CAAACATCCC GCCGTTTAAG CACTTGTACC CAGGTCGAAA AATCGGGCGT ACTGTGGATG AAAGTGCCTC CATGGATTGG TTGCATGTGA CTCAAATGAT CAATGGGTCA GGCAGTAATC AGCGTGGAAA ATATAAATCT GACTACCAAA TCAAGCAGTT TTCAGACGAG ATGTGCCATG CCTTGCTGAC ACACTTGACT ACCGCCACAG CTGATAAGCG TTTCAATCAG TCGCTGGTAC AAATTGATTC CTATGGTGGG GCGATCAACA GCCGTGGCAT CGGGGCAACA GCTGTGTCTC AAAGGAACTC GCTGCTCAAA GCGCAATACC AGACTTATTG GACGAATGAA GCCGATGACC AGACGCACTT AACATGGATC CGCAATATTT ATGCGGCAGT GCATAATGGC AAACCTGCTC CTCCTGAGTT CGAGGGATGC TATATCAATT ATCCCGATAT CGACATGAAA TACACCGATT CAGGTGAGGA AGATCCAAAT TGGTTGAATC TGTACTATGG CTGGGATACG CAATTGATCA AGAGGTTGAT TGCGCTAAAA GCGAGAATCG ATCCTAACAA TATTTTTCAC CATGAACTGT CTATCCCATT AGTGACAGAA TTACCTAAAG CCCCGGTTAA TCTCCACAGC ACGGGGCAAA CGACAACCAG TATTAGTCTC ATGTGGGGGA GCTCGATAGG GGCATTACCT GTTGCCAGCT ATGCCATTTA CCGCGATGGT CATGAAGTGA AACTTCTGAA CGGAACCCAG ACTTCAGCAG AAGATGCCGG TTTGCAACCA AATACGGAGT ACCGCTATTT TGTTGCCGCA GGCGATGAAC ATGGCAACCT GTCAGTGCCC AGCAATGTAC TGACGGTGAG CACCCAAGGC ACACACCCGG CATGGGTACT GAATGGGAGT TACGCTGTTG GTGATGTGGT AAGCAATCTG GGTAAACTCT GGCGCTGTAT TCAGTCGCAC GTAGCCTATG ATCCATTATG GGCTCCGGGG ACTAACGGTG GTATTACGCT ATGGGCGGGG TATACCGCAG GTCGTTAA
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Protein sequence | MKIIDKNVST YETLQKGFNL RWPPNVEQGA ETIYICTTPD EVFAAANTAL AAGNRITVRS GGHCYEGFVS NKLSTERLSI IDLGEMSGLD YDEDKTITSL WDANKNTYRF KSLTGNQNWN GYVSLYKRSG RTIPGGSCYS VGVGGHISGG GYGLLSRLHG LTVDWVTGVD ILVPVGNAHR LAFRHVRADS VSEVDRELFM ACCGAGGGNF GIIIAYYFDD LPKAPQKAYW IPLTYPWSSL KATFPAFLKA YWQWFADNDV NATSTKEGVG NGGLFTLLKL NHIDASDNVV LAIQYTGPNG QVGGANDIPL NDFIEKMNAA AGMTPTIYDD FILPNIPPFK HLYPGRKIGR TVDESASMDW LHVTQMINGS GSNQRGKYKS DYQIKQFSDE MCHALLTHLT TATADKRFNQ SLVQIDSYGG AINSRGIGAT AVSQRNSLLK AQYQTYWTNE ADDQTHLTWI RNIYAAVHNG KPAPPEFEGC YINYPDIDMK YTDSGEEDPN WLNLYYGWDT QLIKRLIALK ARIDPNNIFH HELSIPLVTE LPKAPVNLHS TGQTTTSISL MWGSSIGALP VASYAIYRDG HEVKLLNGTQ TSAEDAGLQP NTEYRYFVAA GDEHGNLSVP SNVLTVSTQG THPAWVLNGS YAVGDVVSNL GKLWRCIQSH VAYDPLWAPG TNGGITLWAG YTAGR
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