Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3773 |
Symbol | ubiA |
ID | 5384353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4252565 |
End bp | 4253431 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640866797 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_001402727 |
Protein GI | 153947917 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGGGAA GTACTGTTCA TACCAAATGG CAGGCTTATT GCCGTTTGAT GCGTATTGAC AAACCGATTG GCTCACTGCT GCTGCTGTGG CCAACATTGT GGGCATTGTG GTTAGCAGGG AGAGGCATCC CCGAGGCCAA AATACTGGTC GTTTTTGTAC TGGGGGTCTT TTTCATGCGT GCGGCAGGGT GTGTCGTCAA TGATTATGCT GACCGCCATA TTGATGGTTT TGTCAAACGC ACCGCATCCC GGCCACTGCC TAGCGGCACT ATCAGTGAGA AAGAGAGCAA AATTCTATTT GTGGTATTGA TATTGCTCTC TTTTGGTTTG GTATTGACCC TCAATAGCAT GACGATATGG CTGTCACTGG CCGCATTGGC ACTGGCTTGG ATCTATCCAT TTATGAAGCG GGTGACTCAT CTGCCGCAGG TGGTATTAGG CGCAGCATTT GGTTGGTCTA TTCCGATGGG GTTTGCCGCC GTTAGCGAAA GCTTGCCGCT GGTCTGCTGG CTACTGTTGC TGGCAAATAT CTGCTGGACC GTGGCCTATG ACACTCAATA CGCCATGGTT GATCGTGACG ATGACCTAAG AATTGGGGTT AAATCTACGG CGATTCTGTT TGGTCAACAT GACAAATTGA TTATCGGCTT GCTGCAACTG GCGACGTTAT TATTAATGGT GGCCATTGGC TGGCTAATGA ATCTGGGCGG TGCATTTTAT TGGTCAATCC TTCTCGCCGG TGCTCTGTTT ACTCATCAAC AGAAAATGAT CGCCCAGCGT GAGCGTGAGC CGTGTTTTCG TGCGTTTTTG AACAATAATT ACGTGGGGTT GATTTTGTTT CTCGGGATAT TGATCAGTTA CTGGTAA
|
Protein sequence | MKGSTVHTKW QAYCRLMRID KPIGSLLLLW PTLWALWLAG RGIPEAKILV VFVLGVFFMR AAGCVVNDYA DRHIDGFVKR TASRPLPSGT ISEKESKILF VVLILLSFGL VLTLNSMTIW LSLAALALAW IYPFMKRVTH LPQVVLGAAF GWSIPMGFAA VSESLPLVCW LLLLANICWT VAYDTQYAMV DRDDDLRIGV KSTAILFGQH DKLIIGLLQL ATLLLMVAIG WLMNLGGAFY WSILLAGALF THQQKMIAQR EREPCFRAFL NNNYVGLILF LGILISYW
|
| |