Gene YpsIP31758_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3773 
SymbolubiA 
ID5384353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4252565 
End bp4253431 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content48% 
IMG OID640866797 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionYP_001402727 
Protein GI153947917 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGGAA GTACTGTTCA TACCAAATGG CAGGCTTATT GCCGTTTGAT GCGTATTGAC 
AAACCGATTG GCTCACTGCT GCTGCTGTGG CCAACATTGT GGGCATTGTG GTTAGCAGGG
AGAGGCATCC CCGAGGCCAA AATACTGGTC GTTTTTGTAC TGGGGGTCTT TTTCATGCGT
GCGGCAGGGT GTGTCGTCAA TGATTATGCT GACCGCCATA TTGATGGTTT TGTCAAACGC
ACCGCATCCC GGCCACTGCC TAGCGGCACT ATCAGTGAGA AAGAGAGCAA AATTCTATTT
GTGGTATTGA TATTGCTCTC TTTTGGTTTG GTATTGACCC TCAATAGCAT GACGATATGG
CTGTCACTGG CCGCATTGGC ACTGGCTTGG ATCTATCCAT TTATGAAGCG GGTGACTCAT
CTGCCGCAGG TGGTATTAGG CGCAGCATTT GGTTGGTCTA TTCCGATGGG GTTTGCCGCC
GTTAGCGAAA GCTTGCCGCT GGTCTGCTGG CTACTGTTGC TGGCAAATAT CTGCTGGACC
GTGGCCTATG ACACTCAATA CGCCATGGTT GATCGTGACG ATGACCTAAG AATTGGGGTT
AAATCTACGG CGATTCTGTT TGGTCAACAT GACAAATTGA TTATCGGCTT GCTGCAACTG
GCGACGTTAT TATTAATGGT GGCCATTGGC TGGCTAATGA ATCTGGGCGG TGCATTTTAT
TGGTCAATCC TTCTCGCCGG TGCTCTGTTT ACTCATCAAC AGAAAATGAT CGCCCAGCGT
GAGCGTGAGC CGTGTTTTCG TGCGTTTTTG AACAATAATT ACGTGGGGTT GATTTTGTTT
CTCGGGATAT TGATCAGTTA CTGGTAA
 
Protein sequence
MKGSTVHTKW QAYCRLMRID KPIGSLLLLW PTLWALWLAG RGIPEAKILV VFVLGVFFMR 
AAGCVVNDYA DRHIDGFVKR TASRPLPSGT ISEKESKILF VVLILLSFGL VLTLNSMTIW
LSLAALALAW IYPFMKRVTH LPQVVLGAAF GWSIPMGFAA VSESLPLVCW LLLLANICWT
VAYDTQYAMV DRDDDLRIGV KSTAILFGQH DKLIIGLLQL ATLLLMVAIG WLMNLGGAFY
WSILLAGALF THQQKMIAQR EREPCFRAFL NNNYVGLILF LGILISYW