| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3759 |
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| Symbol | rhaU |
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| ID | 5386897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4234834 |
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| End bp | 4235148 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866783 |
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| Product | L-rhamnose 1-epimerase |
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| Protein accession | YP_001402713 |
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| Protein GI | 153949563 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3254] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATACGTA AAGCGTTTGT TATGGCAGTA AATCCGGATG CCCATGCTGA ATATCAGCGA
CGGCACACGC CAATCTGGCC AGAGCTGGAA AGCGTGCTGA AAGCGCATGG CGCTCACCAC
TATTCCATTT TCCTTGATGA GACACGCAAT TTACTGTTTG GCGTTGTCGA AATTGAATCA
GAAGAACGCT GGAATGCGGT GGCTCAAACC GCCGAGTGTC AACGCTGGTG GCAACATATG
GCTGATGTCA TGCCAAGCCA CCCGGATAAC AGCCCTGTGA GTCAGGCTCT GCGCGAAGTA
TTTTATCTGG AATGA
|
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| Protein sequence | MIRKAFVMAV NPDAHAEYQR RHTPIWPELE SVLKAHGAHH YSIFLDETRN LLFGVVEIES
EERWNAVAQT AECQRWWQHM ADVMPSHPDN SPVSQALREV FYLE
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