| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3757 |
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| Symbol | rhaD |
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| ID | 5384384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4232781 |
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| End bp | 4233605 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640866781 |
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| Product | rhamnulose-1-phosphate aldolase |
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| Protein accession | YP_001402711 |
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| Protein GI | 153948153 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCTA TTCTATCTTC CTGGTTTATT CAGGGAATGA TTAAAGCCAC CAGTGATATG
TGGCACAAAG GGTGGGATGA ACGTAACGGC GGCAATATCA GCTTGCGACT GCTCGCTGAA
GAGGTTGAAC CTTATCGTCG TGATTTTTAC CAACAACCCC GCAAAGTGGA GCTCACGCAA
CCGGCTCCCG AACTGGCAAA TAGCTGGTTC CTTGTCACCG GTTCCGGCAA GTTTTTCCGC
AATGTTGAAT TGAACCCAGC GGAAAATCTG GTGTTGCTAC AAGTCAGCAA TGATGGCATG
GCTTATGACA TTCACTGGGG CCTAACTCAG GGAGGGTTAC CCACCTCGGA GCTGGCCGCA
CACTTCCAAT CTCACATCGT CAGGATGCAG GTCAGCGGCG GCACCAACCG GGTCATTATG
CACTGCCATG CCACCAATCT GATTGCCCTG AGTTATGTAC AAAAACTGGA GAACGCCAGC
TTCACGCGCC TGTTATGGGA AGGCAGTACG GAATGTTTGG TGGTATTTCC TGATGGGATT
GGCATTGTGC CATGGATGGT GCCGGGCACC GATGGGATCG GTACACAAAC GGCGGAGCAA
ATGCGTGAAC ACAGCCTGGT GCTTTGGCCT TTCCACGGTA TTTTTGGCAG CGGGCCCACA
CTGGATGACG CCTTTGGCCT GATTGATACC GCCGAGAAAT CAGCCGAAAT CATGGTGAAA
GTCCTGTCGA TGGGCGGCAA AAAACAGACC ATTTCACGTG AACAACTGAT CGCGCTGGCG
GCTCGTTTTG ATGTTACGCC GATGGCAGCG GCGCTGGACG CCTAA
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| Protein sequence | MQAILSSWFI QGMIKATSDM WHKGWDERNG GNISLRLLAE EVEPYRRDFY QQPRKVELTQ
PAPELANSWF LVTGSGKFFR NVELNPAENL VLLQVSNDGM AYDIHWGLTQ GGLPTSELAA
HFQSHIVRMQ VSGGTNRVIM HCHATNLIAL SYVQKLENAS FTRLLWEGST ECLVVFPDGI
GIVPWMVPGT DGIGTQTAEQ MREHSLVLWP FHGIFGSGPT LDDAFGLIDT AEKSAEIMVK
VLSMGGKKQT ISREQLIALA ARFDVTPMAA ALDA
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