| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3754 |
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| Symbol | rhaS |
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| ID | 5387860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4228810 |
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| End bp | 4229631 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866778 |
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| Product | transcriptional activator RhaS |
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| Protein accession | YP_001402708 |
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| Protein GI | 153947203 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTAT TGCACAGTAT TGATTTTTTC TCTTCCAGCT CAGCACCTGT GGCGATTGAA
GCGCGTGCGC CGCAATCGGC ATTTCCTGAG CATCATCATG ATTTTTATGA AATTGTTATT
GTAGAAGAGG GGGCTGGCGT ACATGTTTTT AATGGCAATC CCTACACATT AAGTCGCGGT
TGCGTCTGTT TTGTCCGTGA CCATGATCGC CATTTGTTTG AATCCACGGA TGATCTGTTC
CTCACCAACG TATTGTTTCG TGCCCCAGAT GCCTTTCGCT TTTTATCTGG TGTCGGGCAC
TTCCTGCCTC GAGAATGTGA TGGGGTCTAT CCCTCCCATT GGCGGGTTAA CGGCCAGGTT
TTACAGCAAA TAAAGTGCTT GATTGCTTGT CTGGAACACG CCCCGAAAAG TGATCAGGTT
GAGGATATCG CTCTGCATGA AAGTGTTTTT ATGCAGCTAT TGGTGAAACT GTGGCAAGGG
TGTCAGACGC AGGCAGGGGA TGATCAGGAA GGGCGGTTAT ACCAACTGTT GGATTGGCTA
CAAAATAACT ATAGCGAGGC GGTTGAATGG CCGGAATTGG CAGATCGCTT TGCATTGCCA
TTGCGTACTC TACATCGCCA GTTAAAAAAT AAGACCGGGA TGACGCCCCA ACGCTATCTG
ACACGTTTGC GCTTACTGCA AGCCCGTCAT CAACTGTGTT ACAGCGACAA TAGCGTCACT
GACATTGCTT ATCTGTGTGG TTTTGGCGAC AGCAACCACT TCTCAACTTT ATTTAAGCGA
GAGTTTTCGC AGTCTCCCCG TGATTTGCGT AGCCAACTTT AG
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| Protein sequence | MTVLHSIDFF SSSSAPVAIE ARAPQSAFPE HHHDFYEIVI VEEGAGVHVF NGNPYTLSRG
CVCFVRDHDR HLFESTDDLF LTNVLFRAPD AFRFLSGVGH FLPRECDGVY PSHWRVNGQV
LQQIKCLIAC LEHAPKSDQV EDIALHESVF MQLLVKLWQG CQTQAGDDQE GRLYQLLDWL
QNNYSEAVEW PELADRFALP LRTLHRQLKN KTGMTPQRYL TRLRLLQARH QLCYSDNSVT
DIAYLCGFGD SNHFSTLFKR EFSQSPRDLR SQL
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