Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3749 |
Symbol | |
ID | 5388144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4222334 |
End bp | 4224904 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640866773 |
Product | viral enhancin protein |
Protein accession | YP_001402703 |
Protein GI | 153947720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGGTTA TATTTATGAG ACAAGTAACG AAATCAAAGA AAATTAAAAT CTTGCCATAC CCAGAATGGT TAGTTAAGGC CGGGATGTCA AAAGGTATAG ATCATGATAG GCAACATTTA GGCATTATTC TTGCTGCAGG TGAAATGATT AAAGTCAGAC AAGTCAATGC TGAATATAAG GAAAAACTTA AATTATATTT ACTCAATGAT AATAAAAATA CTCAACGATC GATAAGTTTT AATACTGATT GGATAGAGCT GAGTGTCGAT GCTGTTTCAG TACCCTTTAT TAATACCCCA TATAGTGATG GGATTATTCC TGAGATTATT TTTGAGTATC CGGATACTTC TAAATTACTG CCAGTTTATG AAAAAGGAGA GGATGAGAGC ATCTTCTTTG AAAGTTGGGA TAAACAGAAT GCCGAGTTTG GCGTGGTAGA ATCAGAATAT GTAATAATTC TGATCCCGGA AGTTAGTAAG GACAGGCTAA AATCTTTCAG TACGAGTGGC GGTATTGATA CAGTTTTGGG GTTTTATCAA GATATTTTTT CTTTCAATAA TTCTCTGGCT GGCTTGTCTT TTGAACCGCA AAGATATTCT GACGGAAACA CACGAAATCG TTACTTTGCT AAAGCAGATA AAGGGGGCGG TGGGGCAGCA TATTATTCTA ATAATTGGAT TGCCTCATCC TCTGGTTCTA TAAATACATT TTGGCTTTCT CCCAATGCTA CTAACTGGGG CTGCCTACAT GAAATTGCGC ATGGTTATCA GGGCGGGTTT ATTGATGATA AATATTTTTC CACAAGAGAA GTATGGAATA ATATTTATGC TGCCTGCTAC CAAGATGTTA TGTTAGGTGC TGAAAAGTTT AATAAAGGGT GGCTATATAA TTTCGGTAAG CAAAAAGAGG TTGAAAAAAG TATTTTAAAT AACATTAATA ATGGTAAAGA AGTAAATGCT TGGGGGGAAC GTAGCAAATT ATATTTTATC ATGCTGATGC TGGAAAAAGC GGGGGTAAAT TGTTTTACTC ATTTCAACCA GATATATCGT GAGCGTAAAA ATACTGATCA AAGCGTAGGC TCGGTGTTAG ATATGCTCTC AAATAGTTTC GCAACTGTTG AAAATCGAGT TGATGTTACA CCATTTTTAC AAATGGTTGG GGGACATATA TCTAAAAATC AATATCAACG TAACTTATTT AGCCATGCAA AGGCGGTATA TCCATTAAAT CAACTCTTGC AAGGTGATGA ACTCACTGCT GTTAAGAAAA CGCTAGATTT GAATAGTGAA CTCAGTCTTG TTGATGTGGA TAGTATTGAA TTTACAGATA TAAAAAGTAA TTTGACATTG CAATTTTCTA TAGATGATTT CGCTCAGATA TATGGCGAAG AATTGCTTAT ACTGAATGGT GACAACTATG TGTATAATCA ATCTATTATG GATAAAAAAC AAACTTTATA TAATCTCCCC GTTGGTGCTT ATACATTGCG AATTCCAACA GGAAGAAATA AAAAATATGC ACCACAAATT AATTATCTGA TAGTGAAAAA TGAAGATAGC CAAACACAAG TTGATTTTGT CCACAGAATA GGATCTCCAA TTGTTTCACA AAAAATTTCT TTGCAGGGAC TAAATGATTA TACATTTGCA ACTATATTTT TTGATCAAGA AAATGATACT GTCAGCGTTG ATATTACTAA GACTAAACCA CATTATCATT TCCCTGGCAT GTATGCGAGA ATAAGAATAA AAGACAAAGA TAATAATGAG CTACTCAATG AAGTTATTAC AGGAACTAAT CAATCGCTGA GTAAAAATGA TTTTCCACTA TCTTCTTGTT ATGTTATTGA TATCTTTCAC AAAGAGCCTG GTAGGGTAAA GCTAACTCCG GCATATAAAG GTGTGATTGA TAATAAATCC AGTTACAATG AATTTATTAT CACGCCTTAT GGTTTGCAAA ACATCAAATT GAATAATGAT CCAAAGGTTT TTTTATTGGA AAATATAAAA TCGGCAGCAG AAACGCTGCG TAGTCACCCT ATAATGTGGC ATGCGAATTT TTCAGAAGCT AAAGATAATA TATATTTGGC AATCGATATC TTTCCTAGCC CACAAAAGGA AGGTTTACTA GAGCAATATG CTGATTGTAT TTCTTCCTAC TATGAAAAGC CAAATGAAGA CTTGGGTAAT GCATTTAGTT TTATCTTTAA AGGAATTAAT GACCGAGAAT TTTTGACAGC TAAGCTTAAT TTAGTGACAA AAAAACTTGA AGTTAAAATT GTAAGTGGTA CTCCACATAG TGGATTCAAA AGGACTTACG CTGTACTACG TTATTTTAAT GCTGATGGAA ATGAACTCCT TAATCTGGAT ATTATTGGTA GTAAAAAACA GGCTGGACAA GAGTGGGTAT TCCCTATATC AGGTTATGGT GTAGAAAAAC TCTATCTTCA ACATGTGGAA CCTAAAAATA GATTAGTGAT TACCAATATT ATGCAAGGAA TCAGATTATC ATCGCGCACA AGCATACAAA CCTATGAAAT AGAATCTTTG GGGTTGAGTC GTTGCACCTG A
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Protein sequence | MRVIFMRQVT KSKKIKILPY PEWLVKAGMS KGIDHDRQHL GIILAAGEMI KVRQVNAEYK EKLKLYLLND NKNTQRSISF NTDWIELSVD AVSVPFINTP YSDGIIPEII FEYPDTSKLL PVYEKGEDES IFFESWDKQN AEFGVVESEY VIILIPEVSK DRLKSFSTSG GIDTVLGFYQ DIFSFNNSLA GLSFEPQRYS DGNTRNRYFA KADKGGGGAA YYSNNWIASS SGSINTFWLS PNATNWGCLH EIAHGYQGGF IDDKYFSTRE VWNNIYAACY QDVMLGAEKF NKGWLYNFGK QKEVEKSILN NINNGKEVNA WGERSKLYFI MLMLEKAGVN CFTHFNQIYR ERKNTDQSVG SVLDMLSNSF ATVENRVDVT PFLQMVGGHI SKNQYQRNLF SHAKAVYPLN QLLQGDELTA VKKTLDLNSE LSLVDVDSIE FTDIKSNLTL QFSIDDFAQI YGEELLILNG DNYVYNQSIM DKKQTLYNLP VGAYTLRIPT GRNKKYAPQI NYLIVKNEDS QTQVDFVHRI GSPIVSQKIS LQGLNDYTFA TIFFDQENDT VSVDITKTKP HYHFPGMYAR IRIKDKDNNE LLNEVITGTN QSLSKNDFPL SSCYVIDIFH KEPGRVKLTP AYKGVIDNKS SYNEFIITPY GLQNIKLNND PKVFLLENIK SAAETLRSHP IMWHANFSEA KDNIYLAIDI FPSPQKEGLL EQYADCISSY YEKPNEDLGN AFSFIFKGIN DREFLTAKLN LVTKKLEVKI VSGTPHSGFK RTYAVLRYFN ADGNELLNLD IIGSKKQAGQ EWVFPISGYG VEKLYLQHVE PKNRLVITNI MQGIRLSSRT SIQTYEIESL GLSRCT
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