| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3731 |
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| Symbol | |
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| ID | 5387617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4205801 |
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| End bp | 4207354 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866755 |
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| Product | type IV secretion system protein |
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| Protein accession | YP_001402685 |
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| Protein GI | 153949834 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTG ATAAGGATAT CAGGGAGTTT GTCTTTGTTG ATCATCTGCC CTGTGGGCAA
GTCGTGCTGG TTATTGATAA CAATCGACGC ACTGACCCAC GGGTACAGCG CTGGGTGGTG
GAAATGGCGC GTATTCACAC CGGCGCTAAA AACGAGTTTA TGCCCCTCAG TGAATTGAAT
AACCGCCGCG CCCGTATAGC TGATAGTTCG CAATATAGTA TTTGCTTGAA AGACCTGACT
AACATCAGCG AGCGGCAGAA AAAAGTGCTG CATTATTTTG AATTGTCGCG CGAGCTTAGG
GCTTCAGATA TCCATCTCAT CATCGACAGC CAATTGGCTC GGGTAGAAAT GCGTTTACAT
GGTGATCTGG AAGAGGTGGA TTCTCTGCCA AGGGGGGAGG GGATGGCGCT GGCTTCAACC
ATCATTCTCT CGATGTGCGA TGTGGCTGAG ACACAGTTTT ATCCTGGGCG AGAACAGGGT
GGGCGCGTAA AATCTGACTT TGCTCGCAAA GTCGGTGTTT TTGGTGCGCG TTATGAGCAT
CGCCCAACGG CCGACGGCCT TTATGTCGTC ATGCGGATTA TCGATGATGA CGGTGATGCA
GTACCGACGT TGAATACGTT AGGATTTATG CCAGAACAGC GCACGCTGGT AGAGAAAATT
CTACGTATCC CGGAGGGGAT GGTGATCCTC TCTGGCCCTA CAGGGGCGGG GAAAAGTACC
ACTTTACGTA GCTTCAGCCA GATGTATTTG GATCGCACCG GTGGACGGCG TCGGTTGCTG
ACGATTGAAG ACCCGCCGGA AGGGAGAATC AAAGGCGCGA TACAGACGCC CATCATTGCC
GATAAAAGCC GTACCGATGT TGTTCAGCAA GCCTGGAATA GCGCCAATGC TTCTGCTTTA
CGCCTCGATC CTGATGCCAT TCTTAACGGC GAAATGCGTG ACCTCATCTC TATCGTAGCT
GCCGTTTATG CGGCTCAAAC GGGCCATTTG CTTCTGACAA CGCTTCACGC CAACAGTGCT
GTTGGCATTC TCAAACGCAT GGTCGTTTTG GGTGTTTCGG AGGCACTTAT CGCGGATGCC
CAGCTTATCG TGGGGCTTAT CAGCCAGCGC CTTGTTCAAA CGCTGTGTAC GTATTGTCGC
ATTCCCTGGA AAGCCAAGGC CCCGCGACTC ACACCTGAAA TCCGTATGCG CCTCGAACGT
TATTGTTGTG TGGAGGGCGT TTGTCGTCCT GAACAACTGT GGTTTCGTAG TGAGGAAGGA
TGTGTGCATT GCCAGCAACG GCTTTCTATC AGTGATCGTA TCGTCAGCCG CGGTGTGACC
GGGCGCAGTG TGGTGGCGGA GGTGATTCGC CCTGATGCGC GATTTATGTC GCTGTATCTG
GCTCACGGCC CGGCAGTGGC CAGACAATAC TGGGTTAAAT CGCTAAGAGG CATAACGCGT
GTGACTCATC TGTTACATCA ATTGGCTGCG GGTCTGGTTG ATCCCCTTGA TGCAGATTTG
ATCTGTCCAC TAGATGAAGA TCACCTCTTG ACCGGTGAGG TGCCTGATGT CTGA
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| Protein sequence | MIIDKDIREF VFVDHLPCGQ VVLVIDNNRR TDPRVQRWVV EMARIHTGAK NEFMPLSELN
NRRARIADSS QYSICLKDLT NISERQKKVL HYFELSRELR ASDIHLIIDS QLARVEMRLH
GDLEEVDSLP RGEGMALAST IILSMCDVAE TQFYPGREQG GRVKSDFARK VGVFGARYEH
RPTADGLYVV MRIIDDDGDA VPTLNTLGFM PEQRTLVEKI LRIPEGMVIL SGPTGAGKST
TLRSFSQMYL DRTGGRRRLL TIEDPPEGRI KGAIQTPIIA DKSRTDVVQQ AWNSANASAL
RLDPDAILNG EMRDLISIVA AVYAAQTGHL LLTTLHANSA VGILKRMVVL GVSEALIADA
QLIVGLISQR LVQTLCTYCR IPWKAKAPRL TPEIRMRLER YCCVEGVCRP EQLWFRSEEG
CVHCQQRLSI SDRIVSRGVT GRSVVAEVIR PDARFMSLYL AHGPAVARQY WVKSLRGITR
VTHLLHQLAA GLVDPLDADL ICPLDEDHLL TGEVPDV
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