| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3730 |
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| Symbol | pilR |
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| ID | 5385173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4204699 |
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| End bp | 4205799 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640866754 |
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| Product | type IV pilus biogenesis protein PilR |
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| Protein accession | YP_001402684 |
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| Protein GI | 153949596 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTC GTCCTGCCCG AAATATGTCT TTGGCGAAAC GCCTACGGTA TGAGTTGGTG
CGCCATACTT TTAGTGCTCA TTACCGCCTG GAGTTTTATG ACGCATTGCA TTTTTTACTG
GGAAACGGCC ACCCCTTAGG GGCTGCTTTG CGAATGATTG CGGAGGTTCA TACCGATTTT
GGGAAGCTTT GGCATCCTTA TGGCGATTTG GTGGATGACT GTCTGGAGTC GTTATCGGAT
AACAGTACGG GACGTATGCT TGAGGACGTG CTTGCCGCTT GGGGGCCATT GGAAGAGGCC
GCTTTAATCA GCGCAGGTAT GCGTAGTGGA AAATTGCCAG AAGCACTGCG ACAAGCGGGC
AAGTTGGTCG AAGCCCGCCG CCGTATTCTG ACACTGGTTG GCAAAATGTC CCTTTATCCA
CTGCTGTTGC TTAGTCTGGG CAGTGGCATG TTGGGCATCA ATGGCATGTA TTTGATCCCC
ACGCTGCGTA AGCTCTCTGA TCCAGAAAAC TGGCGCGGTG CATTAGGTTT TATGCATGCA
GTGGCCAACG TTACGGACAA GCAGAGTACC GTTGCGGTGG GGGTGATTGC CATCTTGGTT
GGGCTGGTGC TGTGGTCTAT TCCCCGTTGG CGTGGCCGGT TACGCCGCTT TGCTGACAAC
ATAATGCCCT GGTCGGTCTA CAAAGATATT CAAGGGGCGG TGTTCCTGAT GAATATGGCT
GCGCTGCTGA GAGCGAATGT GCAGACGTTA GAGGCGTTGC AGATCTTACT GCCGTTTTCT
TCTCCCTGGC TGCAAGAACG GCTTGACGCC ATTATCGCCT GTATCGAACA GGGCGACCAT
CTGGGGAAGG CTTTGCGTAA TAGCGGCTAC GCATTCCCCA GTAAAGAAGC GGCTAACTAT
CTCTCCTTGC TGACCGAAGG TGATGGCGCG CCAGATATTA TAAGTCGTTA CGGTGATCGC
TGGTTGGAAC AAACGCTGGA GCGAGTCAAC AAGCGGGTCA TTGGCGTCAT GTTTTTCTCT
CTGTTACTGA TTTTCAGTTT CTTCTTACTC ATCTTGTCTA TGGTGATGCA AATTCAGGAT
ATGACCAGTG ACTCAATGTA A
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| Protein sequence | MIFRPARNMS LAKRLRYELV RHTFSAHYRL EFYDALHFLL GNGHPLGAAL RMIAEVHTDF
GKLWHPYGDL VDDCLESLSD NSTGRMLEDV LAAWGPLEEA ALISAGMRSG KLPEALRQAG
KLVEARRRIL TLVGKMSLYP LLLLSLGSGM LGINGMYLIP TLRKLSDPEN WRGALGFMHA
VANVTDKQST VAVGVIAILV GLVLWSIPRW RGRLRRFADN IMPWSVYKDI QGAVFLMNMA
ALLRANVQTL EALQILLPFS SPWLQERLDA IIACIEQGDH LGKALRNSGY AFPSKEAANY
LSLLTEGDGA PDIISRYGDR WLEQTLERVN KRVIGVMFFS LLLIFSFFLL ILSMVMQIQD
MTSDSM
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