Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3727 |
Symbol | |
ID | 5385612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4202151 |
End bp | 4203428 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640866751 |
Product | shufflon protein |
Protein accession | YP_001402681 |
Protein GI | 153950112 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTA AAACCAGAGC ATTGCATCGT GGCTGGGCGA TGATGAGCAC CGGGATTGCC TTGCTCATTT TGGTCATCGT AGTGATTTGG GCAACGTCCA TTTACGGTGA CTATATAAAG CAAAAGGAAT ATCAGGTTAC GGCCGTGCAG TTATCGCGCT TCAAATTTGC CCTTAAAGGA TACGTGGGCC GTCACTATGA CAAGCTATTA GCCTCTGCTG GCACCAATCA GCCTGTTATG GTGACGACAG CGATGTTAAA GAACACCGGT TTCTTGCCAG GCGGCTTCAG TGATACCACG ACAACCGGAC AACGTTTTCA GGCTGCGATA GTACGCAACG CGATGCGAAC CGAGCAATTG CAAGCGCTGA TAGTTACACA AGGCGGAAGC CGTTTACCTT ACAAAGCACT ACGGATTATT TCCGCAGATA TTGAGGGGCT GGGCGGGTAT GTGTGGAACA ATGCCAATGT TACAGGTGCA ATGGGGAGTT GGAGCGTACC GCTAAACAGC TTTGGTCTCA GCACCTCAAC TGGGCATGTG GCTGCGTTAT TAACCACTGA CGAACTGAGT GACGCACGCA ATGAAAGTGA CCGACTTTAT CGCTTTGCCG TTACGGGTAA ACCAGACTTT AACCGCATGC ACACGAGTAT TGATATGGGA GGAAATAACC TGAATAACAC CGGCACGGTA AACGCCATTG AGGGGCGTTT CAGCGGTAAT ATTAATGTTG TTGATGTCAC CGCCGAAGGC AATATCCGCA GCCAACAAGG CTGGTTGATA TCACGCGGCG ATAAGGGCTG GCTCAACGAG AGCTACGGTG GTGGATTTTA TATGTCGGAC AATGACTGGG TCAGGTCAGT CAATAATAAA GGTATTGTTA CCGGAGGCCA GATTAAAGGC GGAAATATAC GCTCAGATGG GCGTCTCTCT GTCGGTGAAG TTTTACAACT GGATCAGGTA AATAGCGCTG GCAGCGAGTG CGGTTCAAAT GGTCTGGTCA GCCGCGATGC CTCTGGAGCT TTGCTCTCCT GCCAATCTGG CGTGTGGGGA ACCCACGGTA AAGTTGACGT CATCAACGGC AATAACCCTA CTTGCCCGGC GAATAAAATC CCAGTGGCAC GCTATTGGAC ACAAGCGGGT GGGAGTAATT ACGGCAATTA TTGCACACTT CAGACGGGTT GGGCTGGTGT CACAATGCCA AGTTGCGAGT CCTGCGTTAA CTGGGAGAAA TGTCACATGG TATATTCGCA AACATGGTCT GCTACGGCAT GTAGCTAG
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Protein sequence | MTFKTRALHR GWAMMSTGIA LLILVIVVIW ATSIYGDYIK QKEYQVTAVQ LSRFKFALKG YVGRHYDKLL ASAGTNQPVM VTTAMLKNTG FLPGGFSDTT TTGQRFQAAI VRNAMRTEQL QALIVTQGGS RLPYKALRII SADIEGLGGY VWNNANVTGA MGSWSVPLNS FGLSTSTGHV AALLTTDELS DARNESDRLY RFAVTGKPDF NRMHTSIDMG GNNLNNTGTV NAIEGRFSGN INVVDVTAEG NIRSQQGWLI SRGDKGWLNE SYGGGFYMSD NDWVRSVNNK GIVTGGQIKG GNIRSDGRLS VGEVLQLDQV NSAGSECGSN GLVSRDASGA LLSCQSGVWG THGKVDVING NNPTCPANKI PVARYWTQAG GSNYGNYCTL QTGWAGVTMP SCESCVNWEK CHMVYSQTWS ATACS
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