| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3684 |
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| Symbol | |
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| ID | 5387017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4154029 |
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| End bp | 4156044 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640866707 |
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| Product | putative oxidoreductase Fe-S binding subunit |
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| Protein accession | YP_001402638 |
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| Protein GI | 153948456 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT TTATTGTTGC TGACGCTGAG AGCTGTATTG GTTGTCGGAG TTGTGAAGTG
GCTTGTGTGG TCGCCCATCA TGAGGGCCAG TTTCCTGATA AACCGGAATA TTTCACCCCA
CGGGTGAAAG TATTCAAAGG CGATCAATGT GCGACGGCAG TATTTTGCCA TCATTGTGAA
GATGCCCCTT GTGCCAGCAC CTGCCCGAAT GGTGCCATTG TTGAATTGAA TAATAGTATT
CAGGTGATTC AGGAAAAATG TATTGGCTGT AAAACCTGTA TGATCGCCTG CCCGTTTGGC
ATGATGACCG TGGTCACCGA AACGGTTCAA CCCGCCAGCC ACCGCTTAGC GGATGTCTAT
CGGCGTACAG AAGCACAAAA ATGTGACCTT TGTCTTGATC AGCCTGATGG CCCAGCCTGT
ATTAAAACCT GCCCTACGCA GGCTCTGACC TTGGTGGACC AACAATATTT ACTGCATCAA
CAGCAGCAAA AGCGCCAACA CATGGCGCTG AATGAGCACA ATGGCCGCTT GTTCAGTCGC
GCGGTGGTAC AGGCGGCCAG TGCATCGTCA AATAAAAGCA TCCGCGACGC AACACCGGTT
AACCTCTTGC AGCGGCCACG GGCACCACGT CTGGAGCCGA AAAAAATTCC GTTGGCAGAG
CGTAAAACGG GTTTTGCTGA AATCTATCTG CCATTTACCG AAAGCCAAAT CCATGAACAG
GCTGAACGCT GCCTGGAATG CGGTGATAAA ACCATCTGTC AGTGGACATG CCCACTGCAT
AACGCCATCC CGAAATGGAT CTCGCTGGCC CATCAGGGGC GGATCCATGA AGCAGCAGAA
TTATCCCATC AAACCAGCAG CTTGCCCGAA GTGTGTGGCC GGGTATGCCC GCAAGATCGC
TTATGTGAGC AGTCCTGTAC GCTGAATGAC CACGATGGCG CGGTCACTAT CGGGCAGATT
GAGCGGCATA TCACGGAAAC GGCACTGGCG ACCGGCTGGC GGCCTGATCT GTCACAGGTG
AAACCCAGCG GTAAACGGGT CGCTATTATT GGCGCTGGCC CAGCAGGTTT GGGCTGTGCG
GATATTCTGG TACGTAATGG CATCACGCCA GTGGTGTTTG ATCGTTATCC CGAAATTGGC
GGTTTGCTGA CATTTGGTAT TCCGGCTTTC AAGCTGGAAA AATCGGTGAT GACTCGGCGG
AGAGAAATTT TCACCGAGAT GGGCGTGGAG TTTTGCCTGA ATACAGAAAT TGGCCGCGAT
ATCACCATGG AAAACCTGCT CCACGACTTC GATGCTCTGT TCCTCGGGGT TGGGACCTAC
CGTTCCATGC GCTCAGGATT AGAAAATGAG GATGCTCAGG GCGTTTACGA TGCCTTGCCA
TTCCTGATCG GTAACACCCA GCATTTGATG GGTTACACCG CCAATGGCGC TCACCCTTAT
GTCAGTATGC AGGACCAACG CGTGGTGGTG TTGGGGGGCG GTGATACCGC CATGGATTGT
GTTCGAACCT CCCTGCGTCA GGGGGCAAGC CGCGTAGTGT GCGCGTATCG GCGTGATGAG
AAGAATATGC CTGGTTCTAA ACGTGAGGTG AAAAATGCGC GTGAGGAGGG GGCTGAATTT
ATGTTCAACC TCCAGCCGAT GAGCATTGTG GTCGATGAAT CGGGACAGGT GACGGGTATC
AAGATGGTTC GCACTGAAAT GGGACAGGCA GATGCCCAAG GGCGGCGACA AGCCCTGCCT
ATCACCGGTT CCGAGCATCT TATTCCTGCT GATGCCGTGA TCATGGCCTT TGGTTTCAGC
CCGCACCGGA TGTCATGGCT GGCAGAACAT AACGTGGTGC TGGATAAACA GGGGCGCGTG
GTTGCGCCGA CTATCTCCGG CTATCCCTAT CAAACCAGTA ATCCCAAAAT TTTTGCCGGT
GGCGACATTG TGCGAGGAGC TGACTTGATT GTGACCGCCA TCGCGGAGGG GCGCAAAGCG
GCAGAGAGTA TTGCGTATTA TTTGAACGTT TTATAA
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| Protein sequence | MNPFIVADAE SCIGCRSCEV ACVVAHHEGQ FPDKPEYFTP RVKVFKGDQC ATAVFCHHCE
DAPCASTCPN GAIVELNNSI QVIQEKCIGC KTCMIACPFG MMTVVTETVQ PASHRLADVY
RRTEAQKCDL CLDQPDGPAC IKTCPTQALT LVDQQYLLHQ QQQKRQHMAL NEHNGRLFSR
AVVQAASASS NKSIRDATPV NLLQRPRAPR LEPKKIPLAE RKTGFAEIYL PFTESQIHEQ
AERCLECGDK TICQWTCPLH NAIPKWISLA HQGRIHEAAE LSHQTSSLPE VCGRVCPQDR
LCEQSCTLND HDGAVTIGQI ERHITETALA TGWRPDLSQV KPSGKRVAII GAGPAGLGCA
DILVRNGITP VVFDRYPEIG GLLTFGIPAF KLEKSVMTRR REIFTEMGVE FCLNTEIGRD
ITMENLLHDF DALFLGVGTY RSMRSGLENE DAQGVYDALP FLIGNTQHLM GYTANGAHPY
VSMQDQRVVV LGGGDTAMDC VRTSLRQGAS RVVCAYRRDE KNMPGSKREV KNAREEGAEF
MFNLQPMSIV VDESGQVTGI KMVRTEMGQA DAQGRRQALP ITGSEHLIPA DAVIMAFGFS
PHRMSWLAEH NVVLDKQGRV VAPTISGYPY QTSNPKIFAG GDIVRGADLI VTAIAEGRKA
AESIAYYLNV L
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