Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3682 |
Symbol | fdhF |
ID | 5386013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4151279 |
End bp | 4153426 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640866705 |
Product | anaerobic formate dehydrogenase, alpha subunit, -type |
Protein accession | YP_001402636 |
Protein GI | 153947573 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTCACGGT CTGCCCCTAT TGCGGCTCGG GATGTAAGTT AAATTTATTG GTCGAAGACG GCGAGATTGT CGGTGCCGAA CCCGCTGATG GTGTCACTAA TCAGGGAGCG TTGTGTCTGA AAGGGTACTA CGGCTGGGAT TTTCTTAACG ATACCCGCTT GTTGACGCCA CGGTTGACCA CGCCCTTATT GCGGCGTCAG CGAGGCGAGG CGTTTCAGCC CGTGAGTTGG GAGGCGGCGA TTGCGTTTAT CACGGCTAAA CTTAGCGCCA TAAAAGAACG TCATGGGCCT GATGCCATCA TGATGACGGG CTCTTCCCGT GGGCCAGGTA ACGAAGCCAA TTATGTGATG CAAAAATTTG CTCGTGCGGC GATCGGTACC AACAATATTG ATTGCTGCGC CCGCCTGTGC CATGGCCCGT CAGTGGCTGG ATTGCAGCAA ACGCTGGGTA ACGGCGCGAT GAGCAACTCT ATTGGTGAAA TTGAGAATAC TGACTGCATT TTGGTCTTTG GTTATAACGC GGCGGATTCT CACCCCATTG TTGCCAGACG TATTCTGAAA GCCAAAAATA AGGGGGCTAA ACTTATTGTC TGTGATCCAC GGCATATCGA AACCGCCCGT ATCGCCGATC AATGGTTGCC GCTGAAAAAT GGTGCCAACA TGGCACTGGT CAATGCATTT ATTCATGTTC TGATTGAAGA AAAACTCTAC GACGCAAATT ATGTCCGCGA CCATACCCGT GGCTTTGATG AACTGAAAGC AGGCGTTGCC GCATACCGCC CAGAGGATGT TGAACCGATT ACGGGGCTGT CTGCCAAAGC GGTGCGTCAG GCCATGCGCA CTTATGCTGC GGCCCCTGCG GCCACCCTTC TATGGGGGAT GGGCGTGACC CAATGGGGCC AGGCGGTTGA TGTGGTGAAA GGGCTCTCTT CGTTAGCGTT ATTAACCGGT AATCTGGGGC GGCCAAATGT GGGCGTAGGG CCAGTACGAG GTCAGAATAA TGTGCAGGGC GCGTGCGATA TGGGCGTGTT GCCGAATACC TTCCCTGGCT ATGAAAAAGT GACCGACAGT GAGGCCAGAG CGCGTTTTGC TCACGCCTGG GGGGTCGCTG AACTGCCCGC GCATGTTGGG TATTCGATTA CTGATGTGCC GCATAAAGTG GCAGAAGGGA AGCTTAAGGC CTACTACGTA TTTGGTGAAG ATCCAATCCA GACCGAGCCA GATTTAGCGG CGATGCGTGC GGCTTTTGCC GCACTGGATC TGGTCGTGGT GCAGGATATC TTTATGACCA AAACGGCAGA ACTGGCGGAT GTCGTACTGC CTGCAACATC CTGGGGGGAG CATGAAGGGG TCTATACCAG TGCTGACCGG GGGTTCCAGC ACTTTAATAA AGCCATTGAA CCGAAAGGGG ATGTGAAACC GGACTGGGAG ATTATCAGCC TGATATCAAC CGCCATGGGT TACCCGATGG CATACCAAAA TACGCAACAA ATCTGGGATG AGATGCGTGG CCTGTGCCCG CCATTCGCTG GGGCCACCTA TGATAAACTG GCAGGATTGG GCTACGTGCA ATGGCCTTGC CCAACCGAAG ATCACCCTGG AACACCTTAT CTCTATACCG ATAACCAATT CGCGACGGCT GACGGCAAAG GTTTGCTCAG TTGCGCGCCG TGGCAGCCGC CTCATGAGCA GACCGACAGT GATTATCCTC TGGCCCTCTG TACCGTGCGT GAAGTGGGGC ATTACAGTTG CCGCTCAATG ACCGGTAACT GCGCCACGCT AAAAATCTTG GCGGATGAGC CGGGCTATGT GCAAATCCAT CCTGAGGATG CCAGCTATTT GGGGGTTATC GATCAGGCGC TGATCTGGAT TTCATCACGA CGCGGGAAAG TGATCGCCCG TGCCAGTGTG ACCGAACGGG CTAATCGTGG CGCGGTGTAT ATGACCTATC AGTGGTGGAT TGGGGCCTGT AATGAACTGA CTGTGGACCA TGTTGATCCC GTGTCAAAAA CACCGGAATT TAAACATTGT GCGGTTAAGG TCGAGGCGAT TAGCGATCAA ACTGCGGCAG AGCAATATGT TGAGCAACAA TACAGCCAGT TGAAAAAACG GTTATCAGAC GCCGCAGTTG TACCATGA
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Protein sequence | MKKILTVCPY CGSGCKLNLL VEDGEIVGAE PADGVTNQGA LCLKGYYGWD FLNDTRLLTP RLTTPLLRRQ RGEAFQPVSW EAAIAFITAK LSAIKERHGP DAIMMTGSSR GPGNEANYVM QKFARAAIGT NNIDCCARLC HGPSVAGLQQ TLGNGAMSNS IGEIENTDCI LVFGYNAADS HPIVARRILK AKNKGAKLIV CDPRHIETAR IADQWLPLKN GANMALVNAF IHVLIEEKLY DANYVRDHTR GFDELKAGVA AYRPEDVEPI TGLSAKAVRQ AMRTYAAAPA ATLLWGMGVT QWGQAVDVVK GLSSLALLTG NLGRPNVGVG PVRGQNNVQG ACDMGVLPNT FPGYEKVTDS EARARFAHAW GVAELPAHVG YSITDVPHKV AEGKLKAYYV FGEDPIQTEP DLAAMRAAFA ALDLVVVQDI FMTKTAELAD VVLPATSWGE HEGVYTSADR GFQHFNKAIE PKGDVKPDWE IISLISTAMG YPMAYQNTQQ IWDEMRGLCP PFAGATYDKL AGLGYVQWPC PTEDHPGTPY LYTDNQFATA DGKGLLSCAP WQPPHEQTDS DYPLALCTVR EVGHYSCRSM TGNCATLKIL ADEPGYVQIH PEDASYLGVI DQALIWISSR RGKVIARASV TERANRGAVY MTYQWWIGAC NELTVDHVDP VSKTPEFKHC AVKVEAISDQ TAAEQYVEQQ YSQLKKRLSD AAVVP
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