| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3679 |
|---|
| Symbol | dcuA |
|---|
| ID | 5387092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4147609 |
|---|
| End bp | 4148910 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640866702 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_001402633 |
|---|
| Protein GI | 153949386 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCCG TAGAATTAGT CATCGTTCTG CTGGCCATTT TTCTTGGGGC CAGGTTAGGG
GGTATTGGTA TAGGTTTTGC AGGCGGAATT GGTGTTCTGG TATTGGCGAT CATTGGTGTC
AAACCCGGCA GTATCCCGTT TGATGTTATT TCAATCATCA TGGCGGTGAT TGCCGCTATC
TCTGCGATGC AAGTTGCAGG GGGGATGGAT TATCTGGTGC AGCAAACTGA AAAGTTACTG
CGTAAGAACC CAAAACACAT CACCATTCTT GCGCCGCTGG TCACTTATTT TCTGACCATC
TTCGCCGGGA CCGGTAACAT TTCACTGTCA GCTCTGCCAG TCATTGCCGA AGTCGCGAAA
GAACAGGGCA TCAAACCTTG CCGCCCACTG TCTACCGCTG TCGTTTCCGC ACAGATAGCC
ATTACCGCAT CCCCGATTTC TGCGGCAGTG GTATATATGT CTTCGGTCAT GGAAGGTCAG
GGTGTCAGCT ATTTACATCT GCTGATGATC GTTATTCCCT CCACCCTTTG TGCCGTATTT
GTGATGTCTC TCATCGTCTC TTGGTGCTTT AGCTCCAAGC TGTCCGATGA TCCTATTTAC
CTGAAACGTT TGGAAGAAGG TTTAGTCACC CTGCGTGGCG ACACCGTAAA AGTGATCAAA
CCACGGGCGA AAACTTCCGT TCTGCTGTTC CTGGCTGGGG TACTTTGTGT GGTGGCTTAT
GCGATCATCA ACAGCCCAAG TGTTGGGCTC GTTGAAACAC CGCTGATGAA CACCACTAAC
GCTATCCTGA TCATCATGCT GAGTGTCGCT ACCATCACCA CGCTGGTCTG CTCGGTTGAT
ACGGATTCGA TCTTGAACTC CAGCACCTTC AAAGCCGGTA TGAGCGCTTG TATCTGTATC
CTGGGTGTGG CCTGGTTGGG TGATACCTTT GTACAACACA ACCTTGAGTG GATTAAAGAG
ACCGCGGGTA GCTTGATTCA AGCGCACTCA TGGTTACTGG CTGTGATTTT CTTCTTCTGC
TCCGCCCTGC TTTACTCTCA AGCTGCAACC GCCAAGGCAT TAATGCCAAT GGCGCTGGCG
CTGAACGTTT CACCATTGGC GGCAATTGCC TCTTTCGCGG CAGTTTCTGG CCTGTTCATC
CTGCCAACCT ACCCAACACT GGTGGCTGCG GTGCAAATGG ATGACACAGG GACCACCCGT
ATTGGTCGCT TTGTGTTTAA CCACCCGTTC TTTATCCCTG GCACCATCGG GGTTGCACTG
GCCGTTTGTT TCGGCTTTGT GATGGGCGGT CTGGTTCTGT AA
|
|---|
| Protein sequence | MIAVELVIVL LAIFLGARLG GIGIGFAGGI GVLVLAIIGV KPGSIPFDVI SIIMAVIAAI
SAMQVAGGMD YLVQQTEKLL RKNPKHITIL APLVTYFLTI FAGTGNISLS ALPVIAEVAK
EQGIKPCRPL STAVVSAQIA ITASPISAAV VYMSSVMEGQ GVSYLHLLMI VIPSTLCAVF
VMSLIVSWCF SSKLSDDPIY LKRLEEGLVT LRGDTVKVIK PRAKTSVLLF LAGVLCVVAY
AIINSPSVGL VETPLMNTTN AILIIMLSVA TITTLVCSVD TDSILNSSTF KAGMSACICI
LGVAWLGDTF VQHNLEWIKE TAGSLIQAHS WLLAVIFFFC SALLYSQAAT AKALMPMALA
LNVSPLAAIA SFAAVSGLFI LPTYPTLVAA VQMDDTGTTR IGRFVFNHPF FIPGTIGVAL
AVCFGFVMGG LVL
|
|---|
| |