| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3669 |
|---|
| Symbol | frdC |
|---|
| ID | 5385129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4138185 |
|---|
| End bp | 4138577 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640866692 |
|---|
| Product | fumarate reductase subunit C |
|---|
| Protein accession | YP_001402623 |
|---|
| Protein GI | 153948369 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3029] Fumarate reductase subunit C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA AACGTAAAGC TTATGTTCGT ACCATGGCTC CAAACTGGTG GCAACAGCTT
GGTTTCTACC GTTTTTATAT GTTGCGTGAA GGTACATCCA TTCCAGCCGT GTGGTTTAGT
GTGCTATTGA TTTACGGTGT ATTCGCACTG AAGAGTGGCC CCGCAGGGTG GGAAGGGTTT
GTCAGCTTCC TGCAAAACCC GCTGGTGCTA TTTCTGAATA TCCTTACGCT ATTTGCCGCG
CTGCTACATA CCAAAACCTG GTTTGAGCTG GCGCCGAAAG CGGTCAATAT TATCGTTAAA
AGCGAAAAAA TGGGTCCAGA GCCAATGATT AAGGCGCTAT GGGTTGTGAC TGTCGTGGCT
AGCGCGATTA TCCTGGCTGT CGCCTTACTC TAA
|
|---|
| Protein sequence | MTTKRKAYVR TMAPNWWQQL GFYRFYMLRE GTSIPAVWFS VLLIYGVFAL KSGPAGWEGF
VSFLQNPLVL FLNILTLFAA LLHTKTWFEL APKAVNIIVK SEKMGPEPMI KALWVVTVVA
SAIILAVALL
|
|---|
| |