| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3665 |
|---|
| Symbol | genX |
|---|
| ID | 5386806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4134183 |
|---|
| End bp | 4135160 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640866688 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_001402619 |
|---|
| Protein GI | 153949624 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CGGCAAGCTG GCAGCCAAGT GCACCTATCG CCAATTTGTT GAAGCGCGCA
GCAATAATGG CAGAGATTCG GCGCTTTTTC GCCGATCGGG GCGTATTAGA AGTAGAAACG
CCAACCATGA GCCAAGCGAC AGTTACGGAC ATTCATTTAG TTCCATTCGA AACCCGGTTT
GTTGGCCCGG GCGCTGCCGA TGGTTTGACG CTGTACATGA TGACCAGCCC GGAATATCAC
ATGAAGCGGT TGTTAGCGGC GGGCAGTGGC CCTATCTATC AACTGGGCCG CAGTTTCCGC
AATGAAGAGG CTGGCCGCTA TCATAATCCT GAATTCACCA TGCTGGAATG GTACCGCCCT
CATTATGATA TGTATCGTTT AATGAATGAG GTGGATGACC TGTTGCAGCA AATTTTGGAT
TGCAACAGCG CAGAGACCTT ATCCTATCAG CAAGCGTTTT TGCGCCATTT AAATATTGAT
CCGTTGTCTG CTGAAAAAGC ACAATTGCGT GAAGTGGCGG CAAAACTGGA TTTAAGCAAT
ATTGCGGATA CCGAAGAAGA TCGCGATACG TTGCTGCAAT TGTTGTTTAC TGTGGGTGTC
GAACCTTATA TTGGCCGTGA TAAACCGGCA TTTATTTATC ATTTCCCGGC ATCGCAGGCA
TCTCTGGCTG AAATCAGTAC CGAAGACCAC CGTGTGGCGG AACGCTTTGA GGTGTACTTC
AAGGGGATAG AACTAGCGAA TGGTTTCCGA GAGCTGACTG ACGGTGATGA GCAACTGCAA
CGCTTTGAGC AGGATAACCG TAACCGTGCG AAACGGGGCT TACCACAGAA CCCAATCGAT
ATGAATCTTA TCGCAGCACT AAAGCAGGGT TTACCCGATT GTTCAGGTGT GGCTTTAGGG
GTTGATCGCT TGGTGATGCT GGCGTTAAAT GCGGAAAGGT TGAGTGATGT TATTGCCTTC
CCCGTCAATA TCGCCTAA
|
|---|
| Protein sequence | MSDTASWQPS APIANLLKRA AIMAEIRRFF ADRGVLEVET PTMSQATVTD IHLVPFETRF
VGPGAADGLT LYMMTSPEYH MKRLLAAGSG PIYQLGRSFR NEEAGRYHNP EFTMLEWYRP
HYDMYRLMNE VDDLLQQILD CNSAETLSYQ QAFLRHLNID PLSAEKAQLR EVAAKLDLSN
IADTEEDRDT LLQLLFTVGV EPYIGRDKPA FIYHFPASQA SLAEISTEDH RVAERFEVYF
KGIELANGFR ELTDGDEQLQ RFEQDNRNRA KRGLPQNPID MNLIAALKQG LPDCSGVALG
VDRLVMLALN AERLSDVIAF PVNIA
|
|---|
| |