Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3662 |
Symbol | rsgA |
ID | 5385158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4128157 |
End bp | 4129209 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640866685 |
Product | ribosome-associated GTPase |
Protein accession | YP_001402616 |
Protein GI | 153947749 |
COG category | [R] General function prediction only |
COG ID | [COG1162] Predicted GTPases |
TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00000216302 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAGA ATAAACTGTC GAAAGGTCAA CAACGCCGTG TACAGGCTAA TCATCAGCGT AGGCTACGCA CTGATAGAAA ACCTGAGTTA GATGACTCTC AGCTTGGCGA TGCGCAAGAA GGTATCGTAA TCAGTCGCTT CGGTCAGCAT GCCGATGTCG AGGCCGTTGA TGGCACTCAG CACCGTTGTA ATATCCGTCG AACCATCAAA TCACTGGTGA CCGGTGATCG GGTGGTCTGG CGTCCCGGTT TACAAGCGCA GGAAGGTGTG CGAGTTAAAG GTATCGTTGA AGCCGTTCAC GAACGGACAT CCGTCCTGAC TCGCCCAGAT CTCTATGATG GTGTGAAACC TATCGCTGCC AATATCGACC AGATCGTGAT CGTATCGGCG ATCTTACCCG AGCTTTCACT TAATATTATT GATCGCTATT TGGTGGCGTG CGAAACACTG GAAGTCGAGC CGTTAATCGT CCTGAATAAG ATTGACCTGT TGGATGCCGA TGGCCGTAAA TTCGTTGATG GCATGATGGA TATTTATCGT CGTATTGGTT ACGACGTCTT GGAAGTCTCC AGCCAGACAC GTGAGGGGAT GGAAGCCTTT GAGAATGCAC TGACTGGCCG TATCAGTATC TTTGCTGGCC AATCCGGGGT GGGCAAATCC AGCCTATTGA ATGCCCTGTT GCCGCCAACA GATAACGAAA TTTTGGTCAA TACGGTTTCT GGTAACTCGG GCCTCGGCCA GCACACCACA ACCGCCGCAC GTCTGTACCA TTTCCAACAT GGCGGTGATG TGATTGATTC ACCGGGCGTG CGTGAATTTG GTCTGTGGCA TTTAGCTCCG GAACAAATTA CTCAAGGGTT TGTCGAATTC CGTGATTATC TCGGCCATTG CAAATTCCGT GATTGCAGCC ATACCAACGA TCCCGGCTGT GCATTACGCG AAGCCGTAGA GCAAGGTAAA ATTGCTGAGG AACGTTTCGA TAATTACCAT CGAATCCTAG AAAGTATGGA GCAAGCGAAG CCGCGTAAAA CGTCAGACAG TGACGAGAAG TGA
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Protein sequence | MSKNKLSKGQ QRRVQANHQR RLRTDRKPEL DDSQLGDAQE GIVISRFGQH ADVEAVDGTQ HRCNIRRTIK SLVTGDRVVW RPGLQAQEGV RVKGIVEAVH ERTSVLTRPD LYDGVKPIAA NIDQIVIVSA ILPELSLNII DRYLVACETL EVEPLIVLNK IDLLDADGRK FVDGMMDIYR RIGYDVLEVS SQTREGMEAF ENALTGRISI FAGQSGVGKS SLLNALLPPT DNEILVNTVS GNSGLGQHTT TAARLYHFQH GGDVIDSPGV REFGLWHLAP EQITQGFVEF RDYLGHCKFR DCSHTNDPGC ALREAVEQGK IAEERFDNYH RILESMEQAK PRKTSDSDEK
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