| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3656 |
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| Symbol | |
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| ID | 5386292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4121309 |
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| End bp | 4123090 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640866676 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001402610 |
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| Protein GI | 153949299 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000106561 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATTG GTTTATTAAC GCTCAGTTTA TTCGCTCTGC CTCCCGCATT TGCCATGAAA
CTCACTGACA TTAAGGTGAC CAACGGGGCG AGTGAAAGTA AGGTTACTCT CAGCTTTGAT
GGTAAGCCAA TTTATGCATT TTTCTCGCTA AACTCGCCGG AGCGGGTGGT CTTGGATGTC
CGCCAAAGTG GCAATATCTC AGGGTTGCCG CTGGAGTTCA GTGGGCAGAA CCTGTTGAAA
CGAATTCGCT CCAGCACTCC GAAAGATGAA CAAAGTACCC GCCTGGTACT GGAACTGACG
CAGAAAGTAA AAACCCGTGC TGTCACCCAA CAGTCGGGCA ATAACTACAC GGTAGTGCTT
ACCATGACGG CCGTCGCCAG TGCCCCTGTT CGTCAGGCGC AGGCCTCATT AAATCAGACG
AATACCCCGA GTCCTAATGC CGGGCGTGTG GTGCCTCAAG TCACGAGCAA GGATTCAGTA
GCTAAAAATC CGTTTAATAA TAAGCCCGTC GTCGTGGTCA GTAGCGAAAA CGTGACCACG
AATACTGCCC GTCAGATTAA AACTGTGAGT GCGGCTAACA GTAGCCGTGT TGTGGTGGCC
ATAGATGCCG GTCATGGTGG TCAGGACCCA GGCGCTATCG GGCAAAATGG TCTGAAAGAG
AAAAATGTCA CGATCTCCAT TGCCCGCCGG CTTGAGGCAC TGCTCAACCG GGATCCGATG
TTTAAACCGG TGCTGACCCG CAATGGTGAT TACTTTATCT CGGTCATGGG GCGCTCTGAT
GTTGCCCGTA AACAGGGGGC TAATGTCTTG ATTTCTATTC ATGCTGATGC CGCGCCAAAT
CGCAGTGCGA CAGGGGCATC GGTTTGGGTG TTATCAAACC GCCGGGCTAA TAGTGAAATG
GGGAACTGGC TGGAGCAACA TGAAAAGCAA TCAGAACTGC TCGGGGGCGC TGGTGATGTA
CTGGCAAACA CGGCTTCAGA CCCTTATTTG AGTCAGGCGG TTCTGGATTT ACAATTTGGT
CACTCCCAGA GAGTGGGTTA TGACGTCGCG ACTAAAGTGC TGCGTGAGCT ACAAACGGTG
GGTGATATTC ATAAACGCAA GCCGGAGCAC GCCAGCCTTG GGGTGTTACG TTCACCGGAT
ATTCCGTCGC TATTAGTGGA AACCGGCTTT ATCAGTAATA GTACGGAGGA ACGGCTGCTT
GGCAGTAGCG CGTATCAGGA GAAGATTGCT CAGGCCATTT ATAAAGGCTT GCGCAGTTAT
TTCCTCGCGA ATCCGTTACA AGCCGACCCA AAGGTCGAAA GCCGTCCGCT CATTGAAACA
GCGGCGGTTG ACTCCTCAAC ACAGCGTTCA GGTATTAGTC AGCCGGAACC TATTGTGAAT
AATATAAGCA GTAATGCGCA AAGTGGCCGG TCATCGGCTA CTCTGCCTGC AGGTAAGAGC
AAAATCCACA ACGTGCAGCG TGGGGAGACG TTATCGGGTA TTGCCAGCCA ATACGGCGTC
AGCATGGCTG TTTTACGACA AAATAATACG CTGAAAAATG ATGTAGTCTG GGTAGGCCAG
CGGTTGAAAG TGCCCGCGTC GGGCAGTACG GTAACGGCAG TCAAGCCTAA AACAGCCGCT
GTAGCAAAAA GTAAACCTAT TAAGCATCAG GTGAAACGCG GTGATACGCT GTCAGCCATT
GCGGCGAGAT ACGGTGTATC AATGAGTGAG ATTGAGCGGG TGAATAAAAT CAAGTCAGGT
AATGTTCAGC TTGGGCAAAC GCTCACTATT CCACAATCGT AA
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| Protein sequence | MVIGLLTLSL FALPPAFAMK LTDIKVTNGA SESKVTLSFD GKPIYAFFSL NSPERVVLDV
RQSGNISGLP LEFSGQNLLK RIRSSTPKDE QSTRLVLELT QKVKTRAVTQ QSGNNYTVVL
TMTAVASAPV RQAQASLNQT NTPSPNAGRV VPQVTSKDSV AKNPFNNKPV VVVSSENVTT
NTARQIKTVS AANSSRVVVA IDAGHGGQDP GAIGQNGLKE KNVTISIARR LEALLNRDPM
FKPVLTRNGD YFISVMGRSD VARKQGANVL ISIHADAAPN RSATGASVWV LSNRRANSEM
GNWLEQHEKQ SELLGGAGDV LANTASDPYL SQAVLDLQFG HSQRVGYDVA TKVLRELQTV
GDIHKRKPEH ASLGVLRSPD IPSLLVETGF ISNSTEERLL GSSAYQEKIA QAIYKGLRSY
FLANPLQADP KVESRPLIET AAVDSSTQRS GISQPEPIVN NISSNAQSGR SSATLPAGKS
KIHNVQRGET LSGIASQYGV SMAVLRQNNT LKNDVVWVGQ RLKVPASGST VTAVKPKTAA
VAKSKPIKHQ VKRGDTLSAI AARYGVSMSE IERVNKIKSG NVQLGQTLTI PQS
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