Gene YpsIP31758_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3644 
Symbol 
ID5384917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4107917 
End bp4108657 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content54% 
IMG OID640866664 
Product23S rRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_001402598 
Protein GI153949503 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA TTATTTACGG TATTCATGCC GTTAAAGCCC TATTAGAACG TGATCCGCAG 
CGTTTCCTGG AAGTCTTTAT TCTGAAAGGC CGCGACGATC GACGTTTGCA ACCGCTAATC
GCAGAGCTGG AAGCCGCCGG TTTAGTGATT CAGGTGGCTA GCCGCCAGTG GCTGGATTCA
CAGGTTGAGG GGGGCGTCCA TCAGGGGATC GTGGCGCGGG TACGTGAAGG GCGTCAGTAT
CAGGAAAATG ACTTACCTGC ACTACTGGAA AGTGTCGAAA CACCTTTCCT GCTCGTGTTG
GATGGCGTCA CCGATCCACA CAATCTGGGG GCATGTTTGC GTAGCGCAGA TGCCGCGGGG
GTCCATGCGG TTATCGTGCC ACGGGATCGC TCAGCACAGC TAAATGCGAT TGCCAAGAAA
GTGGCGAGTG GTGCGGCTGA AAACGTGCCA TTGATCAAAG TCACCAATTT GGCACGTACC
CTGCGAGTAT TGCAGGAACA TAACGTCTGG ATTGTGGGAA CGGCGGGTGA AGCCGATCAC
ACCCTGTATC AAAGCAAAAT GACCGGTCCG ATGGCATTGG TGATGGGGGC AGAAGGTGAA
GGTATGCGCC GCTTAACCCG CGAACACTGC GACGAACTGA TCAGTATTCC AATGGCCGGG
AGTGTTTCCT CCCTCAACGT TTCTGTCGCG ACAGGTGTCT GTTTATTTGA AGTCGTGCGC
CAGCGTGGAT TGAAAGCCTG A
 
Protein sequence
MSEIIYGIHA VKALLERDPQ RFLEVFILKG RDDRRLQPLI AELEAAGLVI QVASRQWLDS 
QVEGGVHQGI VARVREGRQY QENDLPALLE SVETPFLLVL DGVTDPHNLG ACLRSADAAG
VHAVIVPRDR SAQLNAIAKK VASGAAENVP LIKVTNLART LRVLQEHNVW IVGTAGEADH
TLYQSKMTGP MALVMGAEGE GMRRLTREHC DELISIPMAG SVSSLNVSVA TGVCLFEVVR
QRGLKA