Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3625 |
Symbol | |
ID | 5386728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4090829 |
End bp | 4092565 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640866645 |
Product | OMP85 family outer membrane protein |
Protein accession | YP_001402579 |
Protein GI | 153948759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTACGAT ACCCTATTCT GTGTTTTGTG TGTCTATTGC TCGCCACACC TATCGCCTAT GCCGCCAATG TGCGGCTACA GGTTGAGGGT CTTAGCGGTG ATTTAGAAAG AAACGTCAGG GCACGTTTGT CCACAATTGG CACTGATGAA GTTACCGCAG ATGGCCGTTT TCGTTCACGG GTCGATGAAG CTATTCGGCA GGGGCTGCGC GCATTAGGTT ATTACGATCC CACCATTACG TTTGAATTAC AAAACCGCCC GGCACCCGCA CGTTCAGTGT TAATTGCAAA AGTGGTTCCT GGCGAGCCGG TATTGATTGC CGGTGTCGAT ATCGTACTGC AAGGCGGTGC GAAAACGGAT CCTGATTATC AGGCACTCGT TCGCCGTGAT ACCCCGAAAA TTGGCTCGGT CCTCAACCAT GGTGATTTTG ATAATTTCAC CAGTTCTCTT ACTGGTTTAG CGTTACGCCG TGGCTATTTC GACGCCAATA TGATCAAAAG CCAGCTCGGT GTTGCCGCTC AATTACACGA GGCGTTCTGG GATATTGATT TCGACAGTGG GCAACGTTAC CGCTTTGGTA AGGTTATTTT CCAAGGCTCA CAAATCCGAG AGGATTATCT GCAGAATTTA GTGCCGTTCC ATGAGGGGGA ATTCTATACC TCTGATGAAC TGGCCGAGTT GAACCGCCGC TTGGCAGCCA CCAACTGGTT TAACTCGGTG GTTGTTTCGC CGGATTTCCA AGATGCCAAA GAGAGTAAAA TTTTACCGCT TGATGCGGTC GTTACCCCAC GCACTGAGAA TACCGTCGAA CTGGGGGGCG GTTATGCAAC CGATGTCGGT CCGCGTCTGA CCGCCAGTTG GCGTAAGCCT TGGATGAACT CCTTCGGGCA TAGCTTAACC ACCACTACCG CGCTTTCGGC ACCTGAGCAG ACACTGGATT TCAGCTACCG TATTCCTTTA TTGAGAAACC CCCTCGAGCA GTATTACCTG ATACAAGGGG GCTTTAGACG TACCGACTTA AACGACACTA ATTCAGATAC CACGACCTTG AACGTTGCAC GTTTTTGGGA TCTCTCCAGC GGCTGGCAAA GGGCGATTAA CCTGCGTTGG AGCCTCGATC ACTTTACCCA AGGCAGAGTC ACGGATACCA CGATGTTGCT GTATCCGGGG GTGAGTATTA ATCGTACCCG CCAACGTGGT GGGGCGATGC CGGTCTGGGG GGATAGCCAG CGCTATTCTA TTGATGTGTC TGATACGACT TGGGGGTCGG ATGTTGATTT TGGCATCTTT CAGGCGCAGA ACGTGTGGAT CCGGACCTTA GGTGAGAAAA ATCGTTTTGT GGCGCGTGGC AATGTGGGGT GGATCGAAAC CAATAATTTT GACCGTGTTC CACCGTCGCT GCGTTTCTTC GCCGGGGGCG ACCGCAGTAT CCGTGGCTAT AAATTCCGTA ATATTTCACC GCGTGATAGT GACGGAAAAT TAACCGGGGC TTCCAAGTTG GCAACGGGCT CTCTTGAATA TCAATATAAC TTCACGGGTA GATGGTGGGG GGCCGTTTTC GTCGATTCGG GCGAGGCGGT GAATAATTTC AGCAAGAGTG ACTTAAAAAC AGGGGCAGGT GTCGGGGTAC GTTGGGCATC ACCCGTTGGA CCGATCAAAC TGGATATCGC GGCACCAATA GGCGATAACG AGACACATGG CGTGCAATTT TACATCGGTT TGGGGCCTGA ACTATGA
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Protein sequence | MLRYPILCFV CLLLATPIAY AANVRLQVEG LSGDLERNVR ARLSTIGTDE VTADGRFRSR VDEAIRQGLR ALGYYDPTIT FELQNRPAPA RSVLIAKVVP GEPVLIAGVD IVLQGGAKTD PDYQALVRRD TPKIGSVLNH GDFDNFTSSL TGLALRRGYF DANMIKSQLG VAAQLHEAFW DIDFDSGQRY RFGKVIFQGS QIREDYLQNL VPFHEGEFYT SDELAELNRR LAATNWFNSV VVSPDFQDAK ESKILPLDAV VTPRTENTVE LGGGYATDVG PRLTASWRKP WMNSFGHSLT TTTALSAPEQ TLDFSYRIPL LRNPLEQYYL IQGGFRRTDL NDTNSDTTTL NVARFWDLSS GWQRAINLRW SLDHFTQGRV TDTTMLLYPG VSINRTRQRG GAMPVWGDSQ RYSIDVSDTT WGSDVDFGIF QAQNVWIRTL GEKNRFVARG NVGWIETNNF DRVPPSLRFF AGGDRSIRGY KFRNISPRDS DGKLTGASKL ATGSLEYQYN FTGRWWGAVF VDSGEAVNNF SKSDLKTGAG VGVRWASPVG PIKLDIAAPI GDNETHGVQF YIGLGPEL
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