| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3616 |
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| Symbol | mdh |
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| ID | 5384857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4080320 |
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| End bp | 4081258 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866636 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001402570 |
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| Protein GI | 153948383 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.0606227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG CAGTTCTCGG TGCCGCTGGT GGGATTGGCC AGGCCCTCGC TCTTCTACTC
AAGACCCAGC TTCCTTCAGG TTCAGACCTC TCTTTATATG ATATCGCGCC AGTAACGCCT
GGTGTTGCTG TTGATCTGAG CCATATCCCT ACAGCCGTTA ACATTAAAGG CTTCAGCGGC
GAAGATGCTA CACCAGCCCT TCAAGGGGCA GATATTGTGC TGATTTCTGC TGGTGTCGCA
CGTAAACCTG GTATGGATCG TTCGGATCTG TTCAACGTCA ATGCGGGCAT TGTTCGTAAT
CTGGTTGAGC AAATTGCACG TACTTGCCCG AACGCATTGA TTGGTATCAT CACTAACCCA
GTCAACACAA CCGTCGCTAT TGCGGCTGAA GTGCTAAAAA AAGCAGGCGT TTATGACAAG
AATAAGCTGT TTGGTATTAC CACTCTGGAT ACCATTCGCT CCAATACCTT TGTTGCCGAA
TTAAAAGGTA AGCAACCCCA GGATATCGAA GTGCCGGTTA TTGGTGGCCA CTCTGGTGTG
ACTATCTTGC CATTGCTATC ACAGATCCCT GGCGTTAGCT TTACAGAACA AGAAGTTGCA
GATTTGACCA AACGTATCCA GAACGCGGGT ACCGAGGTTG TAGAAGCTAA AGCCGGTGGC
GGGTCCGCGA CGCTGTCTAT GGGGCAAGCT GCGGCACGTT TTGGTCTTTC TTTGGTACGT
GCCCTGCAAG GTGAAAGCAA TGTTGTTGAA TGCTCTTATG TTGAAGGCGA TGGCAAATAT
GCCCGCTTCT TTGCTCAGCC TATTCTACTG GGTAAAAACG GTGTCGCTGA ACGTAAAGAT
ATCGGTAAAC TGAGTGCTTT TGAGCAACAA GCGCTGGAAA ATATGCTTGA TGTTTTACAC
AAAGATATCG AGTTAGGTGA GAAGTTCGTT AATCAATAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPSGSDL SLYDIAPVTP GVAVDLSHIP TAVNIKGFSG
EDATPALQGA DIVLISAGVA RKPGMDRSDL FNVNAGIVRN LVEQIARTCP NALIGIITNP
VNTTVAIAAE VLKKAGVYDK NKLFGITTLD TIRSNTFVAE LKGKQPQDIE VPVIGGHSGV
TILPLLSQIP GVSFTEQEVA DLTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR
ALQGESNVVE CSYVEGDGKY ARFFAQPILL GKNGVAERKD IGKLSAFEQQ ALENMLDVLH
KDIELGEKFV NQ
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