| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3606 |
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| Symbol | dacB |
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| ID | 5388143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4071642 |
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| End bp | 4073090 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866626 |
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| Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
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| Protein accession | YP_001402560 |
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| Protein GI | 153948391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000025642 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTT CACGAATTGT CAGTGGATTG GCCTGTTCTA TCATACTCAA TATCAGTGTA
TCTAATGCCA ATGCGGCTCA GGTCGAGAAT TACACTCAGT ATCTGCCTGA TGGGGCAAAT
CTTGCGTTAA TGGTCCAAAA AATTGGGGCA TCAACCCCTG CAATAGACTA TCACGCTCAG
CAGATGGCGC TACCGGCCAG TACGCAAAAA GTACTGACGG CCTTGGCGGC GTTATTGCAA
CTCGGCCCAG ACTTTCGCTT CAATACTACC TTGGAAAGCC ATGGCACGAT TACTGATGGT
GTGTTGCGAG GTAATTTAAT TGCCCGGTTT GGTGGTGACC CAACGTTAAC GCGTCAACAA
CTGCGTAATA TGGTTGCGAC TCTCAGAAAA GCGGGGGTTA AACAGATCGC GGGGGATGTG
GTGATTGATA CCTCAGTATT CGCCAGTCAT GACAAAGCAC CGGGTTGGCC ATGGAACGAT
ATGACGCAAT GCTTTAGTGC GCCGCCTGCT GCTGCCATTG TTGATCGCAA CTGTTTTTCA
GTCTCTCTTT ACAGTGCGCC CAATCCCGGC GATACCGCAT TTATCCGTGT CGCGTCTTAT
TATCCGGTGC AAATGTTCAG TGAAGTCCGC ACGTTAGCCA AAGGCTCACC CGATGCACAA
TATTGTGAGT TGGACGTCGT GCCAGGCGAA TTAAACCGGT TTACGCTTAC CGGTTGTCTG
ACGCAGCGCA GCGAACCTTT GCCATTGGCC TTTGCTGTGC AAAATGGGGC CAGCTACGCC
GGGGCTATCT TAAAAGATGA ATTGAAAAAA GCTGATATTC AAATTGATGG CAATCTGCGC
CGCCAAACAA TACCGAGTCC TGCGGGAAAC GTGCTAGCAC AGACCCAATC AGCCCCCTTA
CATGATTTGC TGAAAATCAT GCTGAAAAAA TCAGACAATA TGATCGCTGA CACCGTCTTC
AGAACCATTG GTCATCAGCG TTTTGGGGTT CCGGGTACTT GGCGCTCGGG TGCCGATGCC
GTTCGCCAAA TTTTACGCCA AAAAGCAGGC GTTGATCTTG GTAACAGCAT TGTGGTGGAT
GGATCTGGCC TATCGCGCCA TAATCTTATT TCACCAGCAA CAATGATGCA GGTTTTGCAA
TATATTGCTC AAAATGATCA AGAGCTTAAT TTTATATCAA TGCTGCCTCT AGCAGGATAT
GACGGTACTC TACGTTATCG TGGTGGCCTG CATGAAGCGG GGGTCAACGG TAAAGTTTCA
GCGAAGACGG GTGCACTGCA AGGGGTTTAC AATCTTGCCG GTTTCATTAC TACCGCTAGT
GGGCAACGTA TGGCATTTGT ACAATTTTTA TCCGGCTATG CCGTTCCACC TGAAGACCAA
AAAAATCGCC GAGCCCCCTT GGTTCGATTT GAGAGCCGCC TCTATAAAGA TATTTATCAG
AATAACTGA
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| Protein sequence | MHFSRIVSGL ACSIILNISV SNANAAQVEN YTQYLPDGAN LALMVQKIGA STPAIDYHAQ
QMALPASTQK VLTALAALLQ LGPDFRFNTT LESHGTITDG VLRGNLIARF GGDPTLTRQQ
LRNMVATLRK AGVKQIAGDV VIDTSVFASH DKAPGWPWND MTQCFSAPPA AAIVDRNCFS
VSLYSAPNPG DTAFIRVASY YPVQMFSEVR TLAKGSPDAQ YCELDVVPGE LNRFTLTGCL
TQRSEPLPLA FAVQNGASYA GAILKDELKK ADIQIDGNLR RQTIPSPAGN VLAQTQSAPL
HDLLKIMLKK SDNMIADTVF RTIGHQRFGV PGTWRSGADA VRQILRQKAG VDLGNSIVVD
GSGLSRHNLI SPATMMQVLQ YIAQNDQELN FISMLPLAGY DGTLRYRGGL HEAGVNGKVS
AKTGALQGVY NLAGFITTAS GQRMAFVQFL SGYAVPPEDQ KNRRAPLVRF ESRLYKDIYQ
NN
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