| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3605 |
|---|
| Symbol | greA |
|---|
| ID | 5384988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4070908 |
|---|
| End bp | 4071384 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640866625 |
|---|
| Product | transcription elongation factor GreA |
|---|
| Protein accession | YP_001402559 |
|---|
| Protein GI | 153947048 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000032178 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TTCCGATGAC GGTACGTGGC GCAGATAAGC TGCGTGAAGA GCTGGATTAT
TTAAAAGGTG TTCGTCGCCC TAAAATTATT TCTGATATCG CTGATGCACG TGAACATGGC
GACTTGAAAG AAAATGCGGA ATATCACGCA GCCCGTGAGC AACAAGGGTT CTGTGAAGGC
CGAATTCAGG AAATAGAAGC CAAGCTTTCA AATGCTCAGG TAATTGATAT CACTAAAATG
CCCAACAATG GCCGTGTTAT TTTTGGTGCC ACTGTTCGTG TATTAAATCT GAACACTGAA
GAAGAACAGA ACTACCGTAT TGTGGGTGAT GACGAGGCTG ATTTTAAACA AAATCTTATT
TCGGTTAATT CGCCTATTGC TCGTGGCCTG ATTGGTAAAG AAGTTGATGA CGTCGTTGTT
ATCCATACGC CAGGCGGCGA AGTAGAATAT GAAATTCTTA GCGTTGAATA TGTGTAA
|
|---|
| Protein sequence | MKQIPMTVRG ADKLREELDY LKGVRRPKII SDIADAREHG DLKENAEYHA AREQQGFCEG
RIQEIEAKLS NAQVIDITKM PNNGRVIFGA TVRVLNLNTE EEQNYRIVGD DEADFKQNLI
SVNSPIARGL IGKEVDDVVV IHTPGGEVEY EILSVEYV
|
|---|
| |