Gene YpsIP31758_3602 details

Gene Information

• Locus tag: YpsIP31758_3602
• Symbol: hflB
• ID: 5386962
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 4067720
• End bp: 4069654
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640866622
• Product: ATP-dependent metalloprotease
• Protein accession: YP_001402556
• Protein GI: 153946925
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00000683259
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAA ACCTAATTCT CTGGTTAGTT ATTGCAGTCG TCTTGATGTC TGTATTCCAG 
AGCTTTGGTC CCAGCGAATC GAATGGCCGT AGAGTGGATT ACTCTACTTT CATGTCCGAC 
GTAACCCAAG ATCAAGTGCG TGAAGCACGT ATCAACGGAC GTGAAATTAA CGTTAGTAAG 
AAAGATAACA GCAAATATAC GACTTTTATT CCGGTCAATG ATCCAAAGCT GCTAGATACC 
TTATTGACTA AAAATGTGAA AGTTGTTGGT GAGCCTCCAG AAGAGCAAAG CTTACTGGCA 
TCTATCTTTA TATCTTGGTT CCCAATGTTG TTATTGATTG GGGTCTGGAT CTTCTTTATG 
CGTCAAATGC AGGGCGGCGG TGGCAAAGGA GCAATGTCCT TTGGTAAAAG CAAAGCTCGA 
ATGCTGACGG AAGATCAGAT AAAAACCTCG TTTGCTGATG TTGCTGGTTG TGACGAAGCA 
AAAGAAGAGG TCAGTGAATT AGTTGACTAC CTGCGTGAGC CAAGCCGTTT CCAGAAATTG 
GGCGGTAAAA TTCCTAAAGG CGTGTTGATG GTAGGCCCTC CGGGGACGGG TAAAACCTTG 
CTGGCGAAAG CCATTGCAGG TGAAGCTAAA GTGCCATTCT TCACAATTTC TGGTTCTGAC 
TTCGTAGAAA TGTTCGTTGG TGTCGGTGCA TCCCGTGTCC GTGACATGTT TGAACAGGCT 
AAAAAAGCTG CGCCTTGTAT CATCTTCATT GATGAAATCG ATGCGGTTGG CCGTCAACGT 
GGCGCTGGTC TGGGTGGGGG TCATGACGAA CGTGAACAGA CGCTGAACCA AATGCTGGTT 
GAAATGGATG GCTTCGAAGG TAATGAAGGC ATCATTGTTA TTGCGGCAAC TAACCGCCCA 
GACGTTCTGG ATCCTGCGTT ATTGCGCCCA GGCCGTTTTG ACCGTCAGGT TGTCGTTGGT 
TTACCTGATG TTCGTGGTCG TGAACAAATT CTGAAAGTTC ACATGCGCCG TGTGCCATTA 
GATACCGATA TTGATGCTTC AGTGATCGCT CGTGGTACTC CAGGCTTCTC TGGTGCTGAT 
TTGGCGAACC TGGTAAACGA AGCTGCATTG TTTGCCGCCC GCGGTAACAA ACGCGTTGTT 
TCTATGGTTG AGTTCGAAAA AGCGAAAGAC AAAATTATGA TGGGTGCGGA ACGTCGCTCC 
ATGGTAATGA CAGAAGCTCA GAAAGAATCT ACGGCCTACC ATGAAGCAGG GCATGCCATT 
ATTGGTCGTT TAGTGCCAGA GCATGATCCA GTGCATAAAG TGACGATCAT TCCTCGTGGC 
CGTGCTCTGG GTGTCACCTT CTTCTTGCCG GAAGGCGATG CAATCAGTGC TAGCCGCCAG 
AAGTTGGAAA GTCAGATTTC TACCTTGTAC GGTGGTCGTC TTGCAGAAGA GATCATTTAT 
GGCCCGGAAA AAGTGTCTAC CGGTGCTTCG AATGATATCA AAGTGGCAAC GTCTATTGCG 
CGTAATATGG TAACGCAGTG GGGCTTCTCC GAAAAACTGG GGCCGTTGCT GTATGCTGAA 
GAAGAGGGCG AAATTTTCCT CGGCCGTTCT GTAGCGAAAG CTAAGCATAT GTCTGATGAG 
ACTGCGCGTA TCATCGATCA GGAAGTTAAA TTACTTGTTG AGCGTAACTA TCAGCGTGCA 
CGTAAATTGT TGTTAGAAAA TATGGATGTT TTACACTCCA TGAAAGACGC GTTGATGAAG 
TATGAAACTA TTGATGCGCC ACAGATTGAT GACTTGATGA ATCGCAAAGA AGTTCGCCCG 
CCAGCGGGTT GGGACAATGT GACCAAAAAT AAATCATCTG ACAATGACAA TACACCAACG 
GCAACCATGC CGGCTGATGA ACCGAATACT CCAACGTCGG GCAATACAGT GTCAGAACAG 
TTGGGTGATA AGTAA 

 

Protein sequence

MAKNLILWLV IAVVLMSVFQ SFGPSESNGR RVDYSTFMSD VTQDQVREAR INGREINVSK 
KDNSKYTTFI PVNDPKLLDT LLTKNVKVVG EPPEEQSLLA SIFISWFPML LLIGVWIFFM 
RQMQGGGGKG AMSFGKSKAR MLTEDQIKTS FADVAGCDEA KEEVSELVDY LREPSRFQKL 
GGKIPKGVLM VGPPGTGKTL LAKAIAGEAK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA 
KKAAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG IIVIAATNRP 
DVLDPALLRP GRFDRQVVVG LPDVRGREQI LKVHMRRVPL DTDIDASVIA RGTPGFSGAD 
LANLVNEAAL FAARGNKRVV SMVEFEKAKD KIMMGAERRS MVMTEAQKES TAYHEAGHAI 
IGRLVPEHDP VHKVTIIPRG RALGVTFFLP EGDAISASRQ KLESQISTLY GGRLAEEIIY 
GPEKVSTGAS NDIKVATSIA RNMVTQWGFS EKLGPLLYAE EEGEIFLGRS VAKAKHMSDE 
TARIIDQEVK LLVERNYQRA RKLLLENMDV LHSMKDALMK YETIDAPQID DLMNRKEVRP 
PAGWDNVTKN KSSDNDNTPT ATMPADEPNT PTSGNTVSEQ LGDK