| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3586 |
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| Symbol | |
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| ID | 5385949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4048334 |
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| End bp | 4049494 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640866602 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001402540 |
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| Protein GI | 153947901 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGTA AAATTATTTT GGCCTGTTTG GTGTTCACGC TTGTCGCTTG TGATCAATCC
TCTTCACCTT CAGCGACACC CTCGCGACAA GAGGTGGGGG TGGTGACCTT AAAAACTCAA
CCGGTCACAT TGAGTAGCGA TTTATCAGGC CGAACGGTGG CGGCAATGAC GTCTGAAGTC
AGGCCACAGG TCGATGGTAT CATCAAGAAA CGCTTGTTTA CTGAAGGATC TGAAGTCACC
GCGGGACAAG TGCTCTATCA AATAGACCCT GCTAGTTATC AGGCCGCTTA TGACACCGCA
AAAGCCGCGC TACAAAATGT TCAGGTCAGC GTAAAATCGG CCAAGCTGAA AGCCCAGCGC
TATGCGGCAT TAGCCAAAGA AAATGGTGTG TCGCAGCAAG ATGCTGATGA CGCCCAAACC
AGCTATCAGC AAGCGCTGGC CAATGTGGCC GAAAAAACTG CTGCGCTGGA AACGGCGCGT
ATCAATTTGG CCTATACCCA AGTGCGGGCA CCCATTTCAG GTCGCATCGG CATTTCCTCT
GTGACACCAG GGGCGCTGGT GACGGCTAAT CAAACCACGG CATTAGCCAC CATCCGTAAC
CTTGATCCCA TTTATGTTGA TTTAACCCAG TCCAGTGCGC AGTTGCTTGC TTTACGCAAA
CAGCAGCAGG CAGGCAATGA CACAGTAGCG AATGCGCCGG TTCAGCTAAC GCTGGAAGAT
GGCTCGGTTT ATGCCCACGA AGGTTCGCTG CAACTGACCG AGGTGGCCGT GGATGAAGCG
ACCGGTGCGG TGACCTTGCG TGCGAAATTC CCTAACCCTG AACACCAATT ATTGCCGGGC
ATGTTTGTTC GCGCTTCAGT ACGGAACGGT GTAAATAACA CCGCTATTTT GGCACCACAG
CAAGGCATCA CTCATGATGC GAAAGGGAAT GCTACCGCGT TGGTGGTTAA TCAACAGCAG
CAAGTTGAGC GGCGTGAAGT GGTAACCGAA CGCACGGTTG ATAGCTACTG GTTGATTAGC
CGTGGGCTGT CTGCAGGTGA CCGCCTGATT GTTGAAGGAA CCGAAAAGGT CAGTGTTGGC
GATGACGTCA AACCGGTAGA GGTGAGCACT ACGCTGCCCG TTGTGGCCGA ACCGACTACG
CCATCAACTG GGGAGAAATA A
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| Protein sequence | MHSKIILACL VFTLVACDQS SSPSATPSRQ EVGVVTLKTQ PVTLSSDLSG RTVAAMTSEV
RPQVDGIIKK RLFTEGSEVT AGQVLYQIDP ASYQAAYDTA KAALQNVQVS VKSAKLKAQR
YAALAKENGV SQQDADDAQT SYQQALANVA EKTAALETAR INLAYTQVRA PISGRIGISS
VTPGALVTAN QTTALATIRN LDPIYVDLTQ SSAQLLALRK QQQAGNDTVA NAPVQLTLED
GSVYAHEGSL QLTEVAVDEA TGAVTLRAKF PNPEHQLLPG MFVRASVRNG VNNTAILAPQ
QGITHDAKGN ATALVVNQQQ QVERREVVTE RTVDSYWLIS RGLSAGDRLI VEGTEKVSVG
DDVKPVEVST TLPVVAEPTT PSTGEK
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