| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3584 |
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| Symbol | oprM |
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| ID | 5388445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4043797 |
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| End bp | 4045203 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640866600 |
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| Product | outer membrane protein oprM |
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| Protein accession | YP_001402538 |
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| Protein GI | 153949331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGTC GTATACTGAT ATTATCGTTA CCCGCGCTGC TGGCCGGATG TATTTCTCTC
GATCCGGACT ATCAGCGCCC AGTGGCACCG GTTCCGGCAA CCTTGCCTTA CTCAACCGCC
AGTAGCAGCA AGGCGGCAGA TATTCCGTGG CAGGAGACGA TCATTGATCC TAAACTGCGC
CAGGTGATTG CGTTGGCATT AGAGAGCAAC CGTGACCTAC GCCAAGCTAT TGCCGATATC
GAAGCGGCCC GTGCGCAATA TGGTGTGCAA CGGGCCGCCC AGCTACCAAC GGTTAATGCA
GGAGTCAATG GCAGCCGTGG GCGCGGATTG TCCGATACCT CTGATGGCAA CAACAATACC
GCTATCAGCC AGAGTTATGG TGCCCAAGCC AGTGTTAGTG CCTTTGAACT GGATTTATTT
GGTAAAAAAA GCAGCTTGTC TCATGCTGAA TTTGAAACCT ATCTGGCAAC AGAAGAAGCG
GCGAAAACCA CCCGCATCAC ACTGATTGCT GATACTGCGA CAGCTTGGGT AACACTGGCG
GCTGACCAGA ATCAATTATT GCTGGCCGAA GAGACGTTAA AAAGTGCGGA GCAATCTTTA
AAATTGGCAC AACTGCGGCA GAAAAATGGG ATAGCGTCAC GTATTGATGT AGCGGCGATG
GAAACGTTGT ATCAATCAGC GCGGGCCGAT GTTGCACAAT ACAAAACCAC GGTAGCGCAG
GATAAAAATG CACTGGATTT GTTGGTGGGC CAACCCGTGG CAGCACATTT ACTGCCAGTG
GCGGCCTCTA CATTGCCGGA GGTCATCAAA GCTGTACCCG TTGGGCTTTC CTCTGATGTG
TTGTTGAACC GGCCTGATGT ATTGGAAGCC GAGCATAAAC TGAAATCGGC CAATGCCAAT
ATTGGGGCCG CTCGGGCGGC ATTCTTCCCC AGTGTGACCT TAACCGCCAG TGGGGGCGTC
AGCAGTTCGG CACTTTCAAC ATTGCTTAGT GAGGGGGCAG GGATTTGGTC ATTAGCCCCG
GCGATTACCT TGCCGATATT TGATGGCGGG GCAAATCGGG CTGCACTGGA ATATTCACAG
GCACAGAAAA CCGGCTACAT TGCCGCATAT GAGAAAGCGA TTCAGACGGC GTTTAAGGAA
GTCGCCGATG CACTGGCGCG TAAAGCGACC ATTCAAGAAC AACGGGCAGC ACAGCAAGCT
TACGTGGCGG CGGCACAAGA AAGTGTTGAA CTGGCACAAA AACGCTATAA ACAGGGAATC
GATACATACT TGAATATGTT AGATGCTCAA CGCACCTTAT ATGCCGCGCA AACTCGTCTG
ATTGCCGTGC AACAGATACA AACTAACAAT TTGATTACGT TGTATAAAGT TTTAGGTGGT
GGGGTATCTG ACGTCGCCAA AGAGTAG
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| Protein sequence | MFSRILILSL PALLAGCISL DPDYQRPVAP VPATLPYSTA SSSKAADIPW QETIIDPKLR
QVIALALESN RDLRQAIADI EAARAQYGVQ RAAQLPTVNA GVNGSRGRGL SDTSDGNNNT
AISQSYGAQA SVSAFELDLF GKKSSLSHAE FETYLATEEA AKTTRITLIA DTATAWVTLA
ADQNQLLLAE ETLKSAEQSL KLAQLRQKNG IASRIDVAAM ETLYQSARAD VAQYKTTVAQ
DKNALDLLVG QPVAAHLLPV AASTLPEVIK AVPVGLSSDV LLNRPDVLEA EHKLKSANAN
IGAARAAFFP SVTLTASGGV SSSALSTLLS EGAGIWSLAP AITLPIFDGG ANRAALEYSQ
AQKTGYIAAY EKAIQTAFKE VADALARKAT IQEQRAAQQA YVAAAQESVE LAQKRYKQGI
DTYLNMLDAQ RTLYAAQTRL IAVQQIQTNN LITLYKVLGG GVSDVAKE
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