Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3564 |
Symbol | phnK |
ID | 5385623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4024831 |
End bp | 4025619 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640866580 |
Product | phosphonate C-P lyase system protein PhnK |
Protein accession | YP_001402518 |
Protein GI | 153950180 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCCC AATCTACCCC TCAGCCGCTG TTGTCGGTGG AGAATCTCAC TCATTTATAT GCGCCGGGCA AAGGATTCAG TGATGTCTCT TTTCAGCTCT ATCCCGGTGA GGTTTTGGGG ATCGTCGGCG AATCCGGCTC GGGTAAAACC ACCTTGCTGA AAGCTATTTC GGCCCGTTTA GCCCCACAGC AGGGGCAGAT CATTTACCGC ACGGGGGTAC AGCAACCGGT TGATTTATAC GAAATGGCCG AAAGTCAGCG CCGCCGTTTG TTGCGTACCG AATGGGGTGT GGTACATCAG CATCCACTGG ACGGCTTGCG CCCACAAGTC TCCGCGGGCG GCAACATCGG CGAACGTTTA ATGGCTACCG GCCAGCGCCA TTACGGCGAG ATCCGCCAAC TTGCAGGCCG CTGGCTGGAA GATGTCGAAA TCCCGTTATC CCGGTTGGAT GACCTCCCCA CCACTTTCTC CGGCGGGATG CAGCAGCGCC TGCAAATCGC CCGTAATTTG GTGACCCATC CGAAACTGGT TTTTATGGAT GAACCTACGG GCGGCTTGGA TGTATCAGTG CAGGCACGTT TACTGGATTT ACTGCGCAAT TTGGTGGTGG AAATGCAGCT AGCCGTGGTG ATTGTCACTC ATGACTTGGG GGTAGCCCGC TTATTAGCTA ACCGTCTATT GGTGATGAAA GAGGGCCAGG TTATCGAAAG CGGCCTGACT GACCGGGTAC TGGACGATCC CCATCACCCC TACACCCAAC TCCTGGTCTC ATCGGTACTG CAAAACTAA
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Protein sequence | MSAQSTPQPL LSVENLTHLY APGKGFSDVS FQLYPGEVLG IVGESGSGKT TLLKAISARL APQQGQIIYR TGVQQPVDLY EMAESQRRRL LRTEWGVVHQ HPLDGLRPQV SAGGNIGERL MATGQRHYGE IRQLAGRWLE DVEIPLSRLD DLPTTFSGGM QQRLQIARNL VTHPKLVFMD EPTGGLDVSV QARLLDLLRN LVVEMQLAVV IVTHDLGVAR LLANRLLVMK EGQVIESGLT DRVLDDPHHP YTQLLVSSVL QN
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