| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3559 |
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| Symbol | phnF |
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| ID | 5387529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4020966 |
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| End bp | 4021691 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640866575 |
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| Product | phosphonate metabolism transcriptional regulator PhnF |
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| Protein accession | YP_001402513 |
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| Protein GI | 153946914 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTAT CTAGACCACC GACCAGCTAT CCCACCCGTT ATCAACATAT TGCGGCCCAG
TTAGAGCAGG AGTTGCGCGG CCATTACCGT TGTGGCGATT ATCTGCCCTC CGAACAACAG
CTCGCCGACC GCTATCAGGT TAACCGCCAT ACCCTGCGCC GGGCAGTGGA TGAATTGGTC
GAGCGCGGCT GGCTACAACG CCGCCAGGGC ATCGGCATTC TGGTGCTCAT GCGCCCTTAT
GACTACCCGC TCCATGCCAA TGCGCGTTTC AGCCAGAACC TACTCGATCA AGGCAGTGAC
CCCACCAGTG AGCGCTTACT TGCCGTTTTA CGCCCTGCGG CCGAGCCTGT TGCAAAAGCA
CTCTCGCTGG CAGAGGGGGA ATCGGTCGTT CATTTGCGCA CCCTGAGGCG GGTTAATGGT
GTGCCGGTCT GCATTATCGA TCACTACCTG CCCGATCTCA GTTGGTGGCC AGTTCTACAA
CAGTTTCACT CGGGTTCACT GCATCAGTTC ATCACACAAC ATTTACAGCA GCCTCTGAAA
CGTAGCCAAA CGCGCATCAG CGCCCGGCGT GCTCAAGCAA AAGAGAGCGC CTTGCTGGAG
ATTGCCACCC ATGCGCCGCT CCTGTGTGTG CGGACGTTGA ATACCCGTGT TGATAACCAA
CAGGTGGCGG AATATTCCCT CAGCCTGACT CGCGCCGACA TGATTGAACT GACCATGGAG
CACTGA
|
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| Protein sequence | MNLSRPPTSY PTRYQHIAAQ LEQELRGHYR CGDYLPSEQQ LADRYQVNRH TLRRAVDELV
ERGWLQRRQG IGILVLMRPY DYPLHANARF SQNLLDQGSD PTSERLLAVL RPAAEPVAKA
LSLAEGESVV HLRTLRRVNG VPVCIIDHYL PDLSWWPVLQ QFHSGSLHQF ITQHLQQPLK
RSQTRISARR AQAKESALLE IATHAPLLCV RTLNTRVDNQ QVAEYSLSLT RADMIELTME
H
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