| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3553 |
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| Symbol | |
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| ID | 5386419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4014983 |
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| End bp | 4015819 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640866569 |
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| Product | ABC dipeptide/oligopeptide/nickel transporter, permease protein |
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| Protein accession | YP_001402507 |
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| Protein GI | 153950409 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATAA TAAAGTTCTA CCGCACGCTG AAGCGTTCCC CGTCCACCAG CATAGGTCTG
TTTATTCTAT CACTGCTGGT TATCATTGCA GTTTTTGCTC CGTGGCTTGC TCCACAGGAC
CCTAACTGGC AAAACGCAGC CGATCGGTTG TTGCCGCCGG GTGACTCGGG CCACTTGCTG
GGCACCGATA GTTATGGCCG CGATATGCTG TCGCGTCTGA TTTACGGTAC CCGGCCAACC
TTGGGATTGG TGCTGCTGGT CACCGTGATC ACATTGCCTC TGGGGTTGTT GGTCGGGGTG
CTTTCTGGCT ATTACGGCGG CTGGCTCGAA CGCATTCTGA TGCGAATCAC TGATGTGGTG
ATGTCGATGC CACGGCTGAT TCTGGCCTTT GCTTTTGTTG CCATGCTCGG CCCCGGTTTA
CTGAACGGCG CATTAGCGCT GGCACTGACA ACCTGGCCGG CGTATGCCCG TCAGGCCAGA
GCCGAAATTC AGTTATTACG TAAAAGTGAT TATTTAGCTG CGGCTGAAAT GATGGGCATC
CGAGGGCTAC GGCTCCTGTG GGGCCACATA TTGCCCATGT GTTTACCGTC TGCCGTTGTG
CGTTTGGCAC TGGATCTGGC GGGCATTATA TTAGCAGCAG CAGGTTTAGG TTTTCTGGGG
CTGGGCGCTC GCCCACCCAT GTCTGAGTGG GGTTCGATGG TCGCCGATGG GATGCAGGTG
ATTTTTGACC AATGGTGGAT TGCGGCCATT CCCGGTTGTG CGATCCTACT CAGCAGCATG
GCCTTTAACC TGTTAGGCGA TGGCCTACGC GATATTCTGG ATCCTCACCA TGACTGA
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| Protein sequence | MPIIKFYRTL KRSPSTSIGL FILSLLVIIA VFAPWLAPQD PNWQNAADRL LPPGDSGHLL
GTDSYGRDML SRLIYGTRPT LGLVLLVTVI TLPLGLLVGV LSGYYGGWLE RILMRITDVV
MSMPRLILAF AFVAMLGPGL LNGALALALT TWPAYARQAR AEIQLLRKSD YLAAAEMMGI
RGLRLLWGHI LPMCLPSAVV RLALDLAGII LAAAGLGFLG LGARPPMSEW GSMVADGMQV
IFDQWWIAAI PGCAILLSSM AFNLLGDGLR DILDPHHD
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